KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111784426
Entry
111784426         CDS       T05351                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111784426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111784426
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   SR proteins
    111784426
SSDB
Motif
Pfam: RRM_1 RNA_bind Nup35_RRM_2 RRM_5 Nup35_RRM DUF2129
Other DBs
NCBI-GeneID: 111784426
NCBI-ProteinID: XP_023520908
LinkDB
Position
Unknown
AA seq 362 aa
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
DPYGKILSVRIRRNFAFVQYELQDDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
PDRKCDRSPDRKRRSPSPIRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
ERGSPDYGRRRSPNPSPYSRREPERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE
RESPTGERRSSYSPRDRERSNPDNGHDQRLNTAGEPGDSPSFGGTESPKHRGYSSRSPRA
EE
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaagccaattttttgtggaaactttgagtatgatgctcgacagcctgatctagaaaga
ctttttagtagatatggcaaagttgatagagtagatatgaaatctggttttgcttttatc
tacatggaggatgagagagatgctgaggatgctatccgtgcacttgatcggagagagttc
ggccgaaaaggccgcagactacgtgttgagtggaccaaacaagaacgtggcattagaaga
ccaggtggaggtggaggaggctcaaggagatcctctactaatacaaggccttcgaagact
ttatttgttattaactttgacccatatcatactaggacaagggatttggagaggcacttt
gatccttatggtaagatattgagcgtaaggatccgaaggaattttgcatttgtccagtat
gaattgcaggacgatgccactagagcattggagcttacaaatatgagcaaattgttagat
cgagtgatttcggtggaatatgctgttcgagatgatgatgagaaaagaagtggatatagt
ccagataggaaatgtgataggtctcctgatagaaaacggcgatccccaagtcccattaga
agagagcgaggaagccctgattatggcatcaatggtattagccgcagtccatataagaaa
caaagggctagtcctgattatggaagtcgtcgtagtccaagtccttatcagagagacatg
gagaggggttctcctgattatggccgtcgtcgtagcccgaatcctagtccttatagtagg
agggagccagagagatcaactgaccatgttagggcccctagacacagttctcctcatcag
agggaaggagcaaatgaagacccagtccccaaccgaatttgcagtccttatgagagagag
agggagagccccactggtgaacgtcgcagtagctatagtcctcgtgatagagagagatca
aaccctgacaatggtcatgaccaacggctaaatacagcaggagaacctggtgatagcccc
agttttggtgggactgagagcccaaagcatcggggatatagcagccgttcccctcgagct
gaggaatga

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