Cucurbita pepo subsp. pepo (vegetable marrow): 111784585
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Entry
111784585 CDS
T05351
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpep01001
]
111784585
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111784585
Enzymes [BR:
cpep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111784585
Protein kinases [BR:
cpep01001
]
Serine/threonine kinases: Other
Other
111784585
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111784585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_THOC3
LisH
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML
WD40
Beta-prop_EML_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
111784585
NCBI-ProteinID:
XP_023521002
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MEPPAMDEQSNEAQGHGEVPPVPSAPAVAAEIQSQSQEERGEVHEEEEAKNEDDELIARA
HNLIEKITSSPDNPSPTVLHALASLLETQESRYIAENGNSSSNARVSHSIGRLGNVVREN
DEFLELISSKFLSDTRYSISIQAAATRLLLCCSLAWTYPHVFEDDVLENIKKWVMEEAGR
ISTEDLNWKNELGGRDVSDSEMLRTYSTGLLAICLVGGSQLVEDVFTARLSAKLMRFLRV
HVLGDVSQKDGNHLIEAKNASGASGIKVRDENRVRVRQVLETSHLDDSRTAEERSVDDQG
FDRDRERGLSRLAPAEECWAGEEEPDGLATRSDVYEVDVEGKDRWHAVDFRDGRTKYGEL
DDNVRDDSTRHKMSRSRSRGKGRMTEGALEIDHALTSPISGNRWRSSRERSSFKNLDVKK
VSDAGRTAGRINCDISSMERDDNDDCYQECRVGSKDISELVKKAVCAAEAEARAVGAPLE
AIKAAGDSAAEFVKSAAFEEFKTSNDEEAAFLAASRAATTVIDAANATEVSRSQSDSNVT
SADPGTTGKEMNEQTEDFFIPDFDSLTQLRKKYCIQCLEILGEYVEVLGPVLREKGIDVC
LTLLQRSSKQSETLNAEMLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRVALTFF
GLSFCLFTIGSLQGIMERVCALPSDVVYQVVQLAIQLLECPQDQARKNAALFFAAAFVFR
AVLDAFDAQDGLQKLLELLNDAASVRSGVNSGALGLSGTGALRNDRSPTEVLTSSGKQIA
YHTCVALRQYFRAHLLLLVESIRPSKSSRSGARNASSVRAAYKPLDISNEAMDTVLLLLQ
KDRKLGAAFVRTRWPAAEKFLNCNGHITMLELCQAPPVDRYLHDLLQYALGVLHIVTLVP
NCRKMIVNATLSNNRVGIAVILDAASIASNFVDPEIIQPALNVLINLVCPPPSISNKPPV
VESRAVYMSGQGDQRERNGESSIVDRGNTSVTGQANNNNSQNQVATPTSRLVGDRRISLG
AGAGCAGLAAQLEQAYRQAREAVRANNGIKVLLHLLQPRIFLPPAALDCLRALACRVLLG
LARDDTIAHILTKLQVGKKLSELIRDSGSQISGTEQGRWQAELSQVAIELISIVTNSGRA
SALAASDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLSKAAYALLKEAKL
TPLPLLAAPSSLAYQVSKLEAPSSQLQWPYGRVPCGFLTDKPKSAREEDTSLKGDINMSC
PRKKPLIFSTPFGTNSKCQPKSLESSSSAVRKLSSASKQSAVPLSSNETTLVIDTESQCK
TPIILPMKRKLSELKDTCTILSSKRLHSNEPGLHSPICPTSISSRKSSLTDFGFSTPKTT
NMRDQLGRPTPGGFWTDGLDDNQHSSSQVGLVTPSSHPGNLNDPQPSNSERLTLDSLVVQ
YLKHQHRQCPTPITTLPPLSLLQPHVCPEPKRSLDAPWNVTSRLGSREFRSIYGGVHGNR
RDRQFVYSRFRPWRTCRDDASALLTCLCFLGDSRVAVGSHDGEVKIFDSNNNSILESCSS
HQSPLTIMESYISGETQFVLSSSSLDVRLWDASSISGGPMHSFEGCKAARFSNAGNVFAA
LASEPARREILLYDIQTCQLELKLSDTNVSSAGRGLAYSHVHFSPSDTMLLWNGVLWDRR
EPGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKLRLLRSVPSLDQTAITFNASGDV
IYAILRRNLEDVMSAVHTRRIKHPLFAAFRTIDAVNYSDIATIPLDRCVLDFTTEETDSF
VGLITMDDQDEMFSSARVYEIGRRRPTDDDSDPDDAESESDEDEDDDDDDDDDADDLDPI
LGLDIDGDGASDSDMSNEDDEDSVSDLDDEDDGDFVMDDIEFGGGPGMLEIMTEGDDEED
GSQLLEYFSSGNDDDDDDFVSNGYGF
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaccggccatggacgagcaatcaaacgaggcacaaggtcacggcgaagtgcct
cctgttccatctgcgccggccgtggcggcggaaattcaatcacaatctcaagaagaacga
ggggaggttcacgaagaagaggaggctaagaatgaagacgacgagttgattgccagggca
cataatttgattgagaagatcacttcttcgcctgataaccccagcccaactgttcttcat
gcccttgcctcacttcttgagactcaagagtccagatacattgcagaaaatggtaattcg
tctagcaatgctcgcgtatctcatagtattggaaggctagggaatgtagtccgggagaac
gatgaatttcttgaattgatttcctcaaagtttctttcggacacaagatactcaatctcc
attcaggctgctgctacaagacttcttttatgctgttcactggcttggacgtatcctcat
gtttttgaggatgacgtcttggaaaacataaaaaaatgggtgatggaggaagctgggagg
atttcgaccgaagatctcaactggaaaaatgaattaggaggaagggatgtgtcagattct
gaaatgttaaggacatattctactggactacttgctatatgcttggttggtgggagtcaa
ttagtagaagatgttttcacggctagattatctgcaaaacttatgcgctttcttcgtgtt
catgttcttggagatgtgagtcaaaaagatggcaatcatttaatagaagccaaaaatgcg
tctggagctagtggcatcaaagttagagatgaaaatagagtgagggtacgacaagttcta
gaaacatctcatttagatgattcaagaacagccgaggaaagatctgtagatgatcaaggt
tttgatagggatcgtgagagaggcctaagtaggctggcaccagcagaagaatgttgggct
ggtgaagaggaacctgatgggttggctacaaggtctgatgtctatgaggttgatgtagaa
ggcaaagacagatggcatgctgtagattttcgggatgggaggacaaaatatggtgagctt
gatgacaatgttagagatgactctacaagacacaaaatgagccgtagcagatctagaggg
aaaggaagaatgactgaaggtgctcttgagattgatcatgcactcacttcaccaatatct
ggtaatagatggcgaagttctagagaaaggagttcgtttaaaaatctggatgttaaaaaa
gtatctgatgctggtaggaccgctggcaggatcaattgtgatatttcttctatggaaaga
gatgataatgatgattgctaccaagaatgcagagttggatcgaaagatatttctgagctt
gtaaagaaagctgtttgtgctgcagaagctgaagcaagagcagtcggtgcaccattagaa
gccataaaagcagcaggtgattctgctgctgagtttgttaagagtgcagcttttgaggaa
tttaaaacttcgaatgatgaagaggctgcatttttagctgcttctagagctgcaactact
gtgattgatgctgcaaatgctactgaggtttccaggagccagagcgattcaaatgttact
tcagcagatccaggtaccacagggaaggaaatgaatgagcaaactgaagattttttcatc
cctgattttgactccctcacacaactgagaaagaaatattgtattcaatgcctcgagatt
cttggggagtatgttgaagtacttgggcctgttttgcgtgaaaagggcatagatgtatgt
cttacactactgcaaaggagttccaagcaaagtgaaacattgaatgctgaaatgctcttg
cctgatgtgatgaaattaatctgtgctttggctgctcatcgtaagtttgcagcacttttt
gttgaccgaggtggcatgcagaaactccttgcagttcccagagttgctctaacatttttt
gggctctctttttgcttgttcacaattggttccctccagggaataatggaacgagtctgt
gcccttccttctgacgttgtctatcaggtggttcaattagccatccagcttcttgagtgc
ccacaagatcaggccaggaaaaatgcagccttattttttgctgctgcttttgtgttcaga
gctgttcttgatgcttttgacgctcaagatggcctacagaaattactggagctgttgaat
gatgctgcgtctgtgaggtctggagtgaactctggggctttaggcctatctggtacagga
gctttgcgaaatgatcgatcaccaactgaagtacttacatcatctggaaagcaaatagct
tatcatacatgtgtggcgttacgtcagtatttcagagctcatcttcttttgcttgtggaa
tctattcgtcctagtaaaagtagtcgaagtggtgctcgaaatgcttcaagtgtgagggca
gcatacaagccacttgatattagtaatgaggctatggatactgtacttctccttctacag
aaggaccggaagcttggtgctgcatttgtaagaactcgttggcctgctgctgaaaagttc
ttaaactgtaatgggcatataaccatgttggagttgtgccaggcccctcctgttgatcgt
tacttgcatgatttacttcaatatgcattgggagttcttcatattgtaacgttagtgccc
aactgccgcaaaatgattgtgaatgccacattaagcaataatcgtgttggtatagctgtc
attttggatgcagcaagtattgctagcaattttgttgacccagagatcattcagccggct
ttgaatgtgttgatcaatcttgtttgtcccccaccatcaatcagcaataaaccacctgtt
gtggagagtagagctgtttacatgtctggtcagggagatcagagagagcgcaatggggag
tctagcattgtagatcgaggcaatacttcagtcactggtcaggctaataacaataattct
caaaatcaagttgcaacaccaacatcaaggttggttggggatcgtcgaatatctttaggt
gcaggagcaggctgcgccggtcttgctgcacaattggaacaagcatatcgtcaagctagg
gaagcagtccgtgctaacaatggtattaaggttcttttgcatcttcttcagccaaggatc
tttcttcctcctgctgctctcgattgtctgcgagctcttgcatgtcgggtcttgcttggt
ttagccagagatgatacaatagcacacatattgacaaaacttcaggtggggaaaaaatta
tcagaactaattcgagattcaggtagccagatatcaggaactgagcaaggtaggtggcaa
gcggagctttcccaggtcgctattgagcttatttcaatagtgacaaattctgggcgggcg
agtgctttggcagctagtgatgctgctaccccaactttgagacggatagaaagagcagcc
atagctgctgctacacctataacttaccattccagggaacttcttcttttaattcacgag
catcttcaggcatctggattaagcaaagctgcctatgcattgctgaaagaagccaagttg
actcctttgcctcttttagcagctccatcatctcttgcataccaagtctccaagctggag
gcaccctcatcccagctgcaatggccttatggtcgagtcccatgtggatttctgacagat
aaaccgaagtctgcacgagaagaagatacaagtttgaaaggcgatattaatatgtcttgt
ccaaggaaaaagccgttgatcttctcaactccttttggtacaaattcaaagtgtcagcct
aaatccctggaatcttcttcctcagcagttagaaaattgtctagtgcttcaaaacaatct
gctgtacctctatcttcaaatgaaacaacccttgtcattgatacggagtctcaatgtaaa
acacccattatcttgcccatgaagcggaagttgtccgagttgaaggatacttgcaccata
ttgtcctcaaagcgacttcactctaatgagccaggacttcattctcctatttgtcctact
tccatttcctctcgcaaaagtagtttaacagatttcggcttttctacccccaaaactact
aacatgagagatcagcttgggcgaccaactcctgggggtttttggaccgatggtttggat
gacaaccaacacagtagttcccaagttggtttggttacaccatcgtcgcatcctgggaat
ctaaatgaccctcaacccagcaatagtgagagactaactctagattcccttgttgttcag
tatctaaaacaccagcaccgccaatgtccaaccccgataactactcttcctccattgtct
cttttgcagcctcatgtttgccctgaaccaaaacgaagccttgatgccccatggaatgta
acatctcgtcttggttcacgtgaatttagaagtatatatggtggagttcatggcaaccgg
agggaccgtcagtttgtctacagcaggtttaggccttggcgaacttgtcgggatgatgct
agtgctcttttgacctgtctttgtttcctaggagactcaagagttgccgtgggcagccac
gatggggaagtcaagatcttcgattccaacaacaatagcatattagagagttgctccagc
catcagtctcctttaactataatggagtcatatatttctggcgagactcagtttgtgctt
tcatctagctctttagacgtaaggttatgggatgcatcctccatttctggtgggcccatg
cattcattcgaaggatgcaaggctgccaggtttagcaatgctgggaacgtttttgcagca
ttggcatctgagcctgctcgacgggaaatactcttgtatgatattcagacctgccaacta
gaactgaaactatctgataccaatgtcagttctgcaggtcgagggcttgcttattctcat
gtacacttcagcccttcggatacaatgttgctctggaatggggtcttatgggatcgacgg
gaaccaggacctgtccatcgctttgatcagttcactgattatggtggtggtggttttcat
ccagctgggaatgaggtaattattaactccgaggtttgggatctacgtaagcttaggctt
ctccgcagtgtaccttccctcgaccaaacggcgataacattcaatgcgagtggtgatgta
atttatgcaatcttgaggagaaatcttgaagatgtaatgtcagctgttcatactcgtcgc
atcaaacatccactttttgctgcatttcggaccattgatgcagtgaactattcagatatt
gcaactatcccacttgatcgatgtgtcctagatttcacaacagaggaaactgattctttt
gttggtttaatcacaatggatgatcaagatgagatgttttcttctgcacgagtctatgaa
attggtcgacgaaggcccactgatgatgattctgaccccgacgatgctgaaagtgagagt
gatgaagacgaagacgatgacgatgacgatgacgatgatgcggatgatttggatccaatt
ttgggtcttgatattgatggggatggtgcgagtgattctgatatgagtaatgaggacgat
gaggacagtgtgagcgatcttgatgacgaggatgatggagattttgtgatggatgatatt
gagtttggtgggggccctggaatgttggagataatgacagaaggtgacgatgaagaagat
ggtagtcaacttctggaatattttagcagtgggaacgacgacgatgatgatgattttgtc
agtaacggatatgggttttaa
DBGET
integrated database retrieval system
