Cucurbita pepo subsp. pepo (vegetable marrow): 111784701
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Entry
111784701 CDS
T05351
Name
(RefSeq) two-component response regulator-like APRR2 isoform X1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111784701
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111784701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Response_reg
BpuSI_TRD
Motif
Other DBs
NCBI-GeneID:
111784701
NCBI-ProteinID:
XP_023521084
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MVCTASDLHGWKDFPKGLRVLLLDGDSNSAAEIKTKLEEMEYVVVTYCNENDALLAISSE
PEMFHVAIVEVTASDHDGTFKFLEAVKDLPTIMISNIHCLSTMMKCIALGAIEFLQKPVS
EDKLRNIWQHVVHKAFNAGGSAVPSSLKPIKESVASILHLELENKENENQVPHELEISSG
DNVDDHELLILPEGSDKYPAPSTPQQKHGMRLVDQMNCLLEKECGEQDGEESKSVETTCT
AQVENSQLSDKEVIKEEENSTDGCGAASNVDHELHDRDNICSSEKNKSKACGLGNPCRTK
VSGKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQKYRMHK
RHVLPKEEDGSWSSSKDPMRKNYYPHPQRHVMAYPPPYHSNHVMPVAPIGSWGHMACPSP
GVQMWAPPPGYPPWRPPDTWPWKSYLGVHGEAWGCPVTPPPPHSPFSSNPHQHISRFEYV
DVHDKSYGIAPSPVDLQLADEEIDKVVKEAISKPWLPLPLGLKPPSTESVLSELSRQQIS
TTPFHINGCKLLH
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcacggctagtgatttacatgggtggaaagattttccaaaggggcttagagtt
ctcctccttgatggagacagcaattctgctgctgagataaaaacaaagcttgaggaaatg
gagtatgttgttgtgacttactgcaatgagaacgatgcattgttagccatttcgagcgaa
cccgaaatgtttcatgtcgccattgtcgaggtaacggcgagtgatcacgatgggacgttt
aaatttcttgaagctgttaaggacttgcctactattatgatttcgaacatccattgcctc
agcacgatgatgaagtgcatagcgcttggtgcgatcgagttccttcagaaaccggtgtct
gaggacaaactgaggaacatttggcagcatgttgttcataaggcattcaatgcaggcggg
agcgccgtcccgagttctttaaagcctatcaaagaatctgttgcctccatattgcatctt
gaattggaaaacaaggagaacgagaatcaagttccacatgagttggaaatatcgagcggg
gacaatgtcgatgatcatgaactactaatactaccagaaggaagtgacaagtatccagct
ccttcaactcctcagcaaaagcatggaatgagattggtggatcaaatgaactgtttgctc
gagaaagagtgcggcgagcaagacggggaagagtctaaatctgtcgaaactacttgtact
gctcaagtggagaactctcagttatctgacaaggaagttattaaagaggaagagaactct
acggatggctgtggggctgcgagtaatgtcgatcacgagttacacgatcgagacaacatt
tgcagttccgaaaaaaacaagagcaaagcatgcggtcttggtaatccgtgtaggacgaaa
gtaagtgggaagaagctgaaggtagactggacgcccgaactgcatcgaaagttcgtacag
gcagtggaacaactcggagtgaatcaagcaattccttctcgaattctagagctgatgaaa
gttgaaggcctgacaaggcataatgtagctagccatcttcagaagtatcggatgcataag
cgacacgtcttgccaaaagaagaagatggtagctggtcgagttcaaaggatccaatgagg
aagaactactatccacatccacagagacatgtgatggcctaccctcctccctatcactca
aatcatgtaatgccagtcgcccccatcggatcgtggggtcatatggcttgtccctcccct
ggtgttcaaatgtgggcgcctcctcccggttatccgccatggcgaccgccagacacttgg
ccgtggaagtcgtatctcggggtgcatggtgaggcgtggggatgccctgtgacaccacca
cctcctcatagccctttctcttcaaatcctcaccagcatatttcgagattcgaatatgtc
gatgtgcacgataaaagctacggcattgcaccgagtcctgttgatcttcaactggctgat
gaggaaattgacaaagtagtgaaagaagcaataagcaagccatggttgccattgcctttg
gggctaaagccaccttcaacagaaagtgtactatcagagctctcaagacaacaaatctcg
accaccccttttcacatcaacggctgtaaactactccactga
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