Cucurbita pepo subsp. pepo (vegetable marrow): 111785078
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Entry
111785078 CDS
T05351
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111785078
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111785078
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NPC1_N
Motif
Other DBs
NCBI-GeneID:
111785078
NCBI-ProteinID:
XP_023521323
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All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MHQPTHFLIFFMSFPLFSLCFGSFHVYPLPVSQYHDQIYGHYPKPRWNTGFYGSMTRQDR
VSSLSGSPKIVNVVDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKPITFS
GPCRSPLTLKIDGMIKASPRMSDYDDDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSC
KVNKELPCRGAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSP
NTDGIHVTETQNVIIRNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSE
AEVSNIRVDRALISGTSNGVRIKTWQGGSGYAKNIMFQNVVMNNVSNPIIIDQNYCDKEE
KSCPQQNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATA
SCENVRLKNRWKVYPQCSS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaccaacccatttcctcatctttttcatgtcatttcccctgttttctctctgt
tttggcagtttccatgtgtacccacttcctgtttctcaatatcatgatcaaatttatggt
cattatccaaaacccagatggaacacgggtttttacggctcgatgacgaggcaggatcga
gtaagctcgctttcgggttcgccaaagatcgtgaatgtggttgattttggagctaaggga
aatggacaagatgacagtaaggcatttgagctagcttggaaggaggcttgttcttctagt
aaggcaatgattttggtgcctaaaggcaggacatattatcttaagccaataactttttca
ggtccttgtagatctcctttgacactaaagatcgatggaatgatcaaagcttctccaaga
atgtcggattacgatgacgatcgacgacattggcttaaattcgaaggcgtcgacaacttt
gttgtagaaggcaatggtatcatcaatggaaatggcaaaaaatggtggcaaaactcttgc
aaagtgaacaaagaacttccttgcaggggagcaccgacggctgtaactttctaccaatgc
atcaacttggttgtggctaacctgaaactagaaaatgcacagcaaatgcatctgacattt
cagaaatgcaccaatgtccaagctttgaatcttcgggtcgtcgccccggagaatagtccc
aacacggatggaattcacgtcacggaaactcaaaatgttataataaggaattgtgtcatt
ggaacaggggatgactgcatttctattgtaagtgggtcaagaaatgttagagcaatggat
atcacttgtgggccaggacatggaattagcattggaagcttaggagctggaaactcagaa
gctgaggtttcaaatataagagtagatagagcattgatatcaggaacaagcaatggggtg
agaataaagacttggcagggaggttctggatatgctaaaaacatcatgtttcaaaacgtt
gtcatgaacaatgtgagcaatccaataattatagaccagaattactgtgataaagaagaa
aagtcatgcccacaacagaattcagcagtgaaagtaagcaatgtggtgtacaagaacatt
agaggaacaagtgcttctgatgatgccataagatttgattgcagcaaaagctccccttgt
caagacatttccatgcttggagttcatctagttagacaaggagatgatgttgctacagct
tcctgtgagaatgttaggttgaaaaatagatggaaagtttatccacagtgctcctcataa
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