Cucurbita pepo subsp. pepo (vegetable marrow): 111785298
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Entry
111785298 CDS
T05351
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111785298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpep03032
]
111785298
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111785298
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111785298
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111785298
BRCA1-C complex
111785298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
Motif
Other DBs
NCBI-GeneID:
111785298
NCBI-ProteinID:
XP_023521477
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All DBs
Position
LG02:complement(12498906..12506450)
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AA seq
531 aa
AA seq
DB search
MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH
KSYLSNVSSKVRISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA
HMYKHGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV
DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV
QGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDKVDESD
NSNIDIIFTQNLIAQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK
DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQRLLTRS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggcttcttccccgtcgatcctctttcaggtgaggaaaaattctacattttt
gcgcctgggaagtataaagtgggtcgtaaaggctgcgatttgactataacaaaagataaa
ggagtttcccgcatccatgcagaaatagttgtagatgctatgatctttttaaattcccac
aagagttatttatctaatgtttcctctaaagtgaggattagcgattgctccaagtatggg
acatttgttagcaggaattctgggttgaaggaaaaaattcacgaacttccaaaaaaagaa
gcaagcttgtatgatggagatgtgatttcatttggatctggcaatgcaacatacaggttc
tcctttgtgcaacttgtgttttatgttcaccattcagtgtccttccaattccagctgctg
agggacaaggtttcatccataggtgcttctacatctcatgatattcgggagtgtacgcat
gtgcttgtagaggaactgatgccttttgatgaagctctagttgacgccatagtggctgag
aaaccttttgttatcacaagttgggttgagttatttgcaggaagaacctcctgtaacgag
attccatgctttgattcctatcatccaacaatgactgtggaagggatgcatgtcaaagtt
gtggatcccaacactcgtaaaaactgtttgagtggatacacttttttattagggtcggca
catatgtacaaacatggggatcggttgaagatgctattgcaacaagttggtggtgcaaat
gttttgtctattgaggacttctcttcagatagccaagactttggtaatggagaaaatgaa
cgggtagtattcattattcctggaggattagcagaaaagttgggttcatcctataaggtt
gattcttattataaaataactgagttggttttgatatcatctgttttgagtggaaagctg
gatagagacaatttgatatcaccctgtgaaccaggttcctctacatgctccactgatgaa
accgtggtagcagaatccgatctcgaagcagaaaccgataaaccagttgcttctaatgtc
caaggttcagatgaacatttaggcataccagatgaacatttaagcaaaccagaggactat
ttaagcaaaccagaggtgtccatcgaccatgctgcttctggatcagctggggaccataaa
acattcagaaatagttacagtggagtcaaaatgagaaacgacaaggtcgatgaatctgac
aacagcaatatagacattattttcactcaaaatttaatcgcgcaacacgtgatgaaacct
tcatcaatagttactgcagaagacggtggaattacgaacttcaaacgcttcaggaagaca
gaaactcactctgggaatagcttttataatcttgttccatttgataagtatccttacaag
gataacggtgatggaagggaagaaattgcagaatccttgaaagaagaaagaaagcgcaag
gaaatggaagctatatctgaagatttatttaataacgaaaagggacgacgtcgtggaatg
gtcggttcccttcaacggctccttactcgttcttag
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