Cucurbita pepo subsp. pepo (vegetable marrow): 111785376
Help
Entry
111785376 CDS
T05351
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111785376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111785376
03036 Chromosome and associated proteins [BR:
cpep03036
]
111785376
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
111785376
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
111785376
RSF complex
111785376
WICH complex
111785376
B-WICH complex
111785376
NORC complex
111785376
BRF complex
111785376
NuRF complex (fruit fly)
111785376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
HDA2-3
DEAD
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
111785376
NCBI-ProteinID:
XP_023521555
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MAKPSKRQVSSDEAMSNGSSSSEEEEQTNEQINEEEDEEELEAVARSAGSDEDEAAEDSD
NDASPVENGEEEDGSNDGDDDKVDISRREKARLKEMQQMKKQKIQDMLDAQNAAIDADMN
NKGKGRLKYLLQQTEIFAHFAKGEHSSSQKKTKGRGRHASKITEEEEDEEYLKEEEDGLS
GTGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYL
HEYRGITGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRNIRENLLVAGKFDV
CVTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQN
NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK
GLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQ
GAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGY
YYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQ
VDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVN
KDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDE
TAELYDFDDEKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPTKPKEPR
IPRMPQLHDFQFFNTQRLSELYEKEVRYLMLTHQKNQLKDTIDVEETEDVGDPLTAEELE
EKEKLLEEGFSSWSRRDFNTFIRACEKYGRNDIKSIALEMEGKTEEEVERYASVFKERYK
ELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECD
RFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEY
DERERQARKEKKLAKSMTPSKRALARQSESPTNLKKRKQLSKDDYVNSGKRRK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccctcgaaacgacaggtgtcttctgatgaagccatgtccaatggctcgagc
tcgtcggaggaagaggagcaaactaacgagcagatcaatgaggaggaggacgaggaggag
ctcgaagcggtagctcgctcggcaggctctgacgaggatgaagctgccgaggattcagat
aacgatgcatcacctgtcgaaaatggcgaggaagaggacggaagtaacgacggcgatgat
gataaagtcgatattagcaggcgtgaaaaggccagactaaaagaaatgcaacaaatgaag
aagcagaagattcaggatatgttggatgcacaaaatgctgcaattgatgctgatatgaat
aataaggggaagggacgcttgaaatatcttctgcaacaaactgagatatttgctcatttt
gctaaaggcgagcattcttcttctcaaaagaaaacgaaaggaaggggtcgtcatgcatca
aagataactgaagaggaagaagatgaagaataccttaaagaggaagaagatggtttatct
gggactgggaacactcgtctccttacacaaccatcttgtatccaagggaaaatgagggat
tatcaactagctgggttaaattggctcattcgactgtatgagaatggcatcaatggaatc
cttgcagatgagatggggcttggcaagacactacaaaccatctctctgttgggctatctt
cacgagtacagaggcataacaggcccccatatggtagttgcaccaaaatctaccctggga
aactggatgaatgaaattcgtcgtttttgccctatcttgcgagctgtaaagtttcttgga
aatcctgatgaaaggaggaatatacgggaaaatttactggtagctgggaagtttgatgtc
tgtgttaccagtttcgaaatggccatcaaggagaagtcttgcttgcgtcgttttagttgg
cgctacattattattgatgaagctcatcgaattaagaatgagaattccctcctttcaaag
acaatgaggctttataataccaactatcgtcttctaatcactggcacgccacttcagaac
aatcttcatgaactgtggtctctcctcaattttcttttgcctgaaatatttagttcagct
gagactttcgatgaatggtttcaaatttctggggaaaatgatcagcaggaggttgttcaa
caacttcacaaggtccttcgaccttttcttcttcggaggctgaaatcggatgttgaaaaa
ggtttaccaccaaaaaaggaaacaatacttaaagtaggcatgtcacagatgcaaaagcaa
tactatcgtgctttgctccagaaggatcttgaagttgttaatgctggtggtgagcgtaaa
cggcttcttaatatagctatgcagctccggaaatgctgtaatcacccatatttatttcaa
ggtgctgaacctgggcctccttacaccactggagatcatcttattacaagtgctggtaaa
atggttcttttggacaagttgcttccaaagctgaaagagcgtgattctagagtcctaata
ttttcgcagatgacaagactgttggacattcttgaagattatttaatgtttcgtggatac
tactactgtcggattgatggtaacactggtggtgaagatcgtgatgcatccattgatgct
ttcaacaagccaggaagtgaaaaatttgttttcttactttcaaccagagctggaggtctt
ggtattaatcttgctactgcagatgtagtcattctttacgacagtgactggaatcctcaa
gttgatctgcaagcccaagatcgtgctcatagaattggtcagaagaaggaagttcaagtg
ttccggttttgcactgagtataccattgaggaaaaagttattgaaagggcttacaagaaa
cttgcccttgatgctttggtgattcaacaaggacgcttagcagagcagaaaactgtcaac
aaggatgagctacttcaaatggtgaggtttggtgctgagatggttttcagttccaaagat
agcaccatcacagatgaggacattgatagaatcattgcaaaaggagaagcagcaacagca
gagcttgatgcaaagatgaagaaatttacagaagatgccattaaatttaagatggatgaa
actgctgaattgtatgatttcgacgatgagaaggatgaaaataaatttgacttcaagaaa
attgttagtgaaaattggattgaaccacctaaaagggagcggaagcgcaattactcggaa
tcggaatactttaagcaaacaatgcggcagggtggtccaacaaaaccaaaggagcccagg
attcctcgcatgcctcagttgcacgatttccagtttttcaacacacaaaggttgagtgaa
ctatatgaaaaagaagtgcggtatctcatgctaacacatcaaaagaatcagttgaaagat
acaatagatgttgaggagactgaagatgtgggtgatccattgacggccgaagaactggaa
gaaaaagaaaaactcttagaggaaggattttcttcatggagtcgcagagatttcaataca
tttattagggcttgtgagaagtatgggcgaaacgatattaaaagtattgctttggagatg
gaaggaaaaacagaagaagaagttgagagatatgcaagtgtctttaaagagagatacaag
gagttaaatgattatgatagaatcatcaagaacatagaaagaggggaagctaggatttct
cgcaaggatgaaataatgaaagctatcggcaagaaactcgatcgctacaaaaatccatgg
ctggagctcaagatccagtatggccagaataaagggaagttgtacaacgaagaatgtgat
cgtttcatgatatgcatggttcacaagctcggttacgggaactgggacgaactgaaagca
gcatttcgtacatcacccttgtttcgctttgattggtttatcaagtcgcgaacaacacaa
gaacttgcaaggaggtgcgataccttaatccggttagtcgagaaggaaaaccaggaatat
gatgaacgggaaagacaggcccgtaaagaaaagaagcttgccaagagtatgacgccatcg
aaacgtgccttggctaggcagtccgagagcccaactaacctaaagaagcggaagcaatta
tctaaggatgattatgtgaactctggtaagaggaggaagtga
DBGET
integrated database retrieval system
