Cucurbita pepo subsp. pepo (vegetable marrow): 111785379
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Entry
111785379 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111785379
KO
K03504
DNA polymerase delta subunit 3
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030
DNA replication
cpep03410
Base excision repair
cpep03420
Nucleotide excision repair
cpep03430
Mismatch repair
cpep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111785379
03410 Base excision repair
111785379
03420 Nucleotide excision repair
111785379
03430 Mismatch repair
111785379
03440 Homologous recombination
111785379
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111785379
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpep03032
]
111785379
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111785379
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111785379
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
111785379
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
111785379
MMR (mismatch excision repair)
DNA polymerase delta complex
111785379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
111785379
NCBI-ProteinID:
XP_023521560
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Position
LG02:complement(4183483..4188079)
Genome browser
AA seq
522 aa
AA seq
DB search
MADIETLGILQDIESLVADKLQVVSYKWLSRSYLISSDTAKRLLQEFVEKHESGLQVVYA
LSGWLKNDPPSYHIRLVSDSKLPEAKQDFDGTCSIQVYSVQASIPKDPAALWNAEFVQAE
ELFKQPFTVDNCLRDNRFCGISNSYVKRSIDEIPASVAAPQPRSAVGAESTKKNESCQNT
TVPQPQKSEMHKVSPNVGLQNPPVVKEVKGENNSTGSFHQTSKPIAVKEKVASLPANKKK
PQSDKSSPSTESSLANLWGRVPTKSKLSDNHENVKHATANPTVSSAEEQICAHEELQSDN
SDDDDQNVNIKRASNEGGRKRRVVIDFSDDEDFEDAVSLASPENPKDQSCLDLKQKTELH
EEKAHLNSDKQQNGELKMEEEKTCVSKQSLVEEKHQNSSLAVKNEVCAHENVSNNREKPT
DAAPASPKRRKVLRTRIDERGREVNEVVWEGEEQEQKKDDISSTKKSDQKAAETTTNRPP
PAKKSPALGNGGANPAGKAGAKKAGNATGPKQGNILSFFKKI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatcgaaaccctaggcattctccaggacatcgaatccctcgtcgccgataag
cttcaagtggtttcctacaagtggctaagtcgcagttatttgatatcttcggatactgca
aagaggttgcttcaggaatttgttgaaaagcatgaaagtggattacaagtggtctatgcc
ttgtccggatggttgaaaaatgaccccccaagctaccatattaggcttgtttctgattca
aaacttcctgaagcaaagcaagattttgatggcacctgctcgattcaagtttatagtgtt
caagcttccattccaaaggatccagccgcactgtggaatgctgaattcgttcaggcagaa
gagctcttcaagcagcccttcactgttgacaattgtttgcgagataacaggttctgtgga
atttccaattcctatgtcaagcgcagcattgatgagatacctgcaagcgttgcggctcct
cagccaagaagtgcagtgggtgcagaatcaacaaaaaagaatgaatcatgtcaaaatact
accgttcctcaacctcaaaaaagtgaaatgcacaaagttagtcctaatgttggtctacag
aatccccctgtggtcaaagaagttaaaggtgaaaataacagtacagggtcatttcatcag
acctccaagccaattgcagttaaagaaaaagttgcttccttacctgctaataagaagaaa
cctcaaagtgataaaagctctcccagtactgaaagttcattagcaaacttgtggggacgt
gtccctaccaagtccaagctcagtgacaaccatgaaaatgtgaagcatgccactgcaaac
cctactgtatcgagtgcagaggaacaaatttgtgcacatgaagaactacagagcgacaac
agtgatgatgacgatcaaaatgtaaatatcaagagggcctccaatgaaggtggaagaaaa
aggagggtggttattgatttctcagatgatgaagattttgaagatgcagtcagtttagca
tcacctgaaaatccgaaggatcaatcatgtttagatctgaagcaaaaaactgaattgcac
gaagagaaagctcatttgaacagtgacaaacaacagaacggtgaactgaaaatggaggag
gaaaagacgtgtgtatcgaagcaatccttagtagaagaaaaacatcagaattcctccctt
gcagtgaaaaacgaggtttgtgcccatgaaaatgtctctaataatagagagaaaccaaca
gacgctgctcctgcttcacccaagaggagaaaagtattgaggacacgaattgatgagcgt
gggagagaagtaaatgaggtggtttgggagggtgaagagcaggaacagaagaaggatgat
atctcttcaacaaagaaatctgatcagaaagcagcagagactactacgaacaggcctcct
ccggccaagaagtcaccagccttgggcaatggtggtgcaaatccagcagggaaagcagga
gccaagaaagctggaaatgcgactggtcccaaacaaggaaatattctttcttttttcaag
aagatttga
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