Cucurbita pepo subsp. pepo (vegetable marrow): 111786491
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Entry
111786491 CDS
T05351
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111786491
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111786491
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
111786491
NCBI-ProteinID:
XP_023522509
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Position
LG02:complement(2771332..2777475)
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AA seq
707 aa
AA seq
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MKKSAFSLSSLSDSLKIFWLFSSLFFYVYGPFIPTTTRDPVVSTTPDTDGHGPDAHGPDG
HSPDGHSPNVSVSLLQLHIQEQYVVMENEIIAVTISNPMGFVTGIEYHGIENLLDVTNPE
DDRGYWDVVWNTAGAKGTKGMFDRIEATDFKVIVQNDEQIELSFSRTYNSSSGDDVVPLN
VDKRFVILRNSSGFYSYAIYEHLKEWPAFNIDNTRIAFKPRKDKFRYMVVADERQRFMPL
PDDRKPPRGVALEYPEAVLLVVPIEPEFKGEVDDKYQYGCESKDSRVHGWISNDPPIGIW
QITASEEYRSGGPLKQVLTSHVGPTSLTVFHSAHYAGAAMVIRFGSNEAWKKVYGPVFIH
INSLPEKEDPLGLWQNAKQQMNAEVQSWPYNFPASKDFIKADQRGTVSGRFMIRERYVSN
ESIPASGAYVGLALPGELGSWQTESKGYQFWSRADENGHFTLENVLSGNYSLNGWVYNFI
SEYQYDAFITVTPGSDIDVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPSPKFINKLF
VNHSDKFRQYGLWERYAELYPKEDLVYTVDQSDYKKDWFFAQVNRKIDDNNTYVGTTWKI
EFKIDSPDTHGTYKLRLALATAHAAELQVRVNDAQAVTPLFTTGVIGKDNTIARHGIHGL
YRFYSVDIPGSELVAGNNTIFLTQTNDHGPFVGIMYDYIRLEGPLTS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtgcattttccctctcaagtttgtctgactccctcaaaatattttggctc
ttttcttctcttttcttttacgtttacgggcccttcatccctacaacgacacgagacccc
gtcgtctcgacgacgcccgacacggatggtcacggccccgatgcacacggccccgatgga
cacagccctgatggacatagccccaatgtttcggtgtctctgttgcaactccacatccaa
gaacaatatgttgtgatggagaatgaaataattgcagtgacgatatcgaatccgatggga
tttgtcaccggaatagaataccatgggattgaaaacttgcttgatgtgaccaatcctgaa
gatgatagaggatattgggacgttgtttggaacaccgcaggagcgaaaggaaccaaaggc
atgtttgatcgaattgaagcaacagatttcaaggtaatcgtacaaaatgacgaacagata
gaactctcattcagcagaacttacaattcatcctccggagacgacgtagttcctttgaat
gtcgacaaaaggttcgtgatactacgaaattcatcaggattctattcgtacgccatttac
gaacacttgaaagaatggccagcgtttaacatcgacaacaccagaatcgcattcaagccg
cgaaaagacaagtttcggtacatggtagtagcagatgagagacagagattcatgccttta
ccagacgatcggaagccaccgcgaggggtagccctagagtatccagaggccgtcctcctt
gtggttcctatagaacccgagttcaagggagaggtagatgacaagtaccaatacgggtgc
gaaagcaaagacagtcgggttcacgggtggatatccaacgacccgcccattggcatttgg
caaatcacagccagcgaggagtatcgctccggtgggcccctcaaacaagttctcacctcc
catgtgggtcccacctcccttacagttttccatagcgctcattacgcaggagcggctatg
gtgatacggtttggaagtaacgaggcatggaagaaggtgtacggccctgtctttatacat
atcaattccttgcctgaaaaagaagatccactcggactttggcaaaatgctaaacaacag
atgaatgctgaagttcaaagctggccttacaatttccctgcgtctaaggattttatcaaa
gcagaccaacgaggcaccgtcagcggcagattcatgatccgtgagagatatgtgagtaat
gaatccatacctgcaagtggtgcatatgtggggttggcacttcctggggaacttggctcc
tggcaaacagaaagcaagggctaccaattctggagcagagcagatgagaatggacatttc
actttggaaaatgttctcagtggaaattatagtcttaatggatgggtctataattttatc
agcgagtaccaatatgatgctttcatcactgtaaccccaggcagcgatatcgatgtgggt
gaacttgttttcgagcccccaagagatggtcctacattatgggaaataggcattccagat
cgtactgctgcagaattctatgtaccagatcctagtcccaagtttattaataaacttttt
gtcaatcattcagataagtttaggcagtatggattatgggaaagatacgcagaattatat
cctaaggaggacctagtttatacggttgaccaaagtgactacaaaaaagattggttcttt
gcacaagttaacaggaagatagacgacaacaacacatatgtaggaactacttggaaaatt
gagttcaaaattgacagtccagatacacatggaacatataagctgcgtcttgcattggcc
actgcacatgctgcagaattacaagttcgagtgaatgatgcacaagcagttaccccgtta
ttcacaactggagtaattggaaaggacaacactatagctagacatggaattcacggcctg
taccggttttacagtgtcgatattccaggcagtgagcttgtggcgggcaacaatacgatt
tttcttacacaaacaaatgaccacggtccttttgttgggattatgtatgattatattcgt
ttagaaggacccttaacgtcctaa
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