Cucurbita pepo subsp. pepo (vegetable marrow): 111786769
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Entry
111786769 CDS
T05351
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like isoform X1
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111786769
Chaperones and folding catalysts [BR:
cpep03110
]
Heat shock proteins
HSP100
111786769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_18
AAA_28
Mg_chelatase
NACHT
Zeta_toxin
IstB_IS21
AAA_25
DNA_pol3_delta2
Torsin
Motif
Other DBs
NCBI-GeneID:
111786769
NCBI-ProteinID:
XP_023522769
LinkDB
All DBs
Position
LG02:11248837..11255631
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AA seq
923 aa
AA seq
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MAGILVQSTNVPGLVGGRKGPPVRGSGSGKRAVKMMSSVHVPGLRLRSFSGLRGSNSLDN
ILKNGQDFHSKIAIAISSRGGKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESTEAVG
AGVGGGTSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALEAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGEFRDREME
LKTKISALIDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKM
EETLHKRVIGQDEAVVAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEISDIMLKEVFERLKVKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSE
GNVTVLNGSSGAAPESLADAIPV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctggaattttggttcaatcgacgaatgttcctggtttggttggtggaagaaagggt
cctcctgtaagaggatcaggaagcggtaaacgggctgttaaaatgatgtctagtgtacat
gtgcctggtttgaggttaagaagcttctctggacttagggggtctaattcgttggataat
atcttgaagaatggacaagattttcattcgaagattgccattgcgatttcttctagggga
ggaaaggctagcagatgtgttccaagagccatgtttgagcggttcactgagaaggcaatt
aaagtaattatgcttgcccaggaggaagcgaggcggcttggccataattttgttggcaca
gagcagatccttttggggcttattggcgaaggcacgggtattgctgctaaggttcttaaa
tctatgggaattaatcttaaagatgcacgtgtggaggtggagaagataattggtcggggc
agtggatttgttgctgtcgaaattccattcactcctcgtgcaaagcgtgttttggaactt
tctcttgaggaagctcgccaactcggccacaattatattgggtcagagcacttgcttcta
ggactacttcgtgaaggtgagggtgttgcagctcgtgttcttgaaaatttaggtgctgat
cccaccaacattcggactcaggttattcgaatggtgggtgagagcacggaggctgttggt
gctggtgttggaggagggaccagtgggaacaaaatgccaactctggaagagtatgggaca
aacttaaccaagctggcagaggagggtaaactggatcctgttgttggtaggcagcagcaa
atagaacgtgtcacccaaattctcggtcggcggacaaaaaataatccttgcctcattggt
gaacctggtgttgggaaaactgctattgctgaaggtctggctcaaaggattgctaatggg
gacgttcctgaaacaatagaagggaagaaggttataaccttggatatgggccttcttgtt
gctggcacaaaatatcgtggagagtttgaggaaagattgaagaaattgatggaggaaata
aaacaaagtgatgagattatcctttttattgatgaggtgcatacattaattggagcaggg
gctgcagaaggagctattgatgcagcaaacatattaaaaccagcccttgctaggggtgaa
ctgcagtgcattggagctacaactctggatgaatacagaaaacacattgaaaaagaccca
gccttagaaaggcgatttcagccggtcaaagtgccggaaccatctgtggatgaaaccata
cagattttgaaaggccttagagagcgctatgaaatccaccacaaacttcgttacacagat
gaagcattagaagctgctgcgcagctgtcataccagtacatcagtgatcgattcttgcct
gataaggcaattgatttgattgatgaagcaggatcccgagttcgccttcgtcatgctcag
ctacctgaggaagctagggagcttgagaaagagctcaggcagattacaaaggagaagaat
gaggctgttcgaagtcaagatttcgagaaggctggagaatttcgtgatagagaaatggaa
ctgaagactaagatctctgctctaatagacaagggcaaggagatgagcaaggcagaaagt
gaggcaggagacgtaggccccgttgtgaccgaagttgatattcagcatattgtctcctcc
tggactggcattcctgttgagaaagtatctacagatgaatctgaccgcctcctcaaaatg
gaagagactctccataagagagtcattggtcaagatgaagcagttgtagccatcagtcgt
gcgatacgccgagctcgtgttggactcaagaatcccaatcgtcccattgcaagctttata
ttttctgggccaactggggttggtaaatctgagttagcaaaagcattggccgcatactat
tttggctctgaagaagcaatgattcgtcttgacatgagtgaatttatggaaaggcatact
gtctccaagctcattggttcgccccctggttatgttggttacacagagggcggtcagtta
acagaggccgttcgtcgtcgtccttacacagtggtgctctttgacgagattgaaaaggct
catcctgatgtgttcaacatgatgcttcaaattctagaggatggaaggttgacagacagc
aagggcagaacagtagacttcaagaatacacttctgattatgacatcaaacgtgggaagc
agtgtaatagagaagggaggccgcagaatagggttcgaccttgattacgacgagaaggat
agtagctataaccgtatcaagagcttggtgacggaggaactgaaacaatacttcaggcca
gagtttttgaacaggttggacgagatgattgtgttccgtcagctcacaaaactggaggtg
aaggagatctcagacataatgctgaaggaggtgttcgaaagattaaaagtaaaagaaatt
gaacttcaagtgacagagagatttagagacagggtggttgatgaaggatacaacccaagc
tacggtgcgagaccattgagaagggcaatcatgagactcttggaggacagcatggccgag
aagatgctagcaagggagatcaaggagggggactcagtaattgtggatgttgattcagaa
ggaaacgtgacagtgctcaacggtagcagtggagctgctcccgagtctttggcggatgct
atccctgtgtaa
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