Cucurbita pepo subsp. pepo (vegetable marrow): 111786964
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Entry
111786964 CDS
T05351
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111786964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111786964
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111786964
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
U-box type E3
111786964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
MLKL_N
HEAT_EZ
zf-RING_UBOX
zf-C3HC4_4
Neurochondrin
KAP
Arm_2
zf-Nse
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111786964
NCBI-ProteinID:
XP_023522915
LinkDB
All DBs
Position
LG02:11139180..11143870
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AA seq
664 aa
AA seq
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MEEDNGALIQSLIDVVNEIAWISDFRLTVKKQYCNLSRRLKLLIPMFEEIRDTKEPVSED
TLKALVLLKEALESAKKLLRFGSQGSKIFLAVEREQIMVKFHEVTAQLEQALEGIAYDKL
DISDEVKEQVELVLAQFRRAKGRADAPDSELMDDIFALYNTSNDSSVDQNRLRRLAEKLQ
LIGISDLTQESLALHEMVTANGGDPGESIETMSGLLKKIKDFVQTENLETDTPGRDKSPP
ASCSGQISNEKNNTAPIIPEDFRCPISLELMRDPVIVSTGQTYERSCIEKWFEAGHGTCP
KTQQNLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPSSDRPCRSSSSCSAAERTKIDILL
CKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTAL
LNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGASGAI
PPLVTLLSQGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGSGMVDEAL
AILAILSSHSEGKAVIGSAKAVPVLVDVIGTGSPRNRENAAAVLLHLCSGDEQHLLEARE
LGVMSSLIDLAQNGTDRGKRKAAQLLERMNRLLEHTEETRVQPPESRPQNQPSLSNSTTE
VAGS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagataacggcgctctgattcagagcttgatcgatgttgtgaacgagattgcg
tggatctcggattttaggcttactgttaagaagcagtattgcaatttgtccaggagattg
aagcttttgatcccaatgtttgaagagattagggataccaaggagccagtctctgaggat
actctcaaggctctcgtattgttgaaagaagctctcgaatcggctaagaagttgctcaga
tttggaagccaggggagcaagatttttctggccgtagagagggagcaaattatggtcaaa
tttcatgaggtaacggctcagttggaacaagctttggaaggaatagcctacgataaactt
gatatatccgatgaagttaaggagcaggtcgagcttgttcttgctcagttcagaagagcc
aaaggcagggccgatgcacctgactctgagctgatggatgatatctttgccctttacaac
acaagcaatgattcttctgtggatcaaaaccgcctccggagattagctgaaaaattacaa
ttaattggaatatccgaccttacacaagagtccttagctttgcatgagatggttactgct
aatggaggtgatccaggtgagagcattgagacgatgtcagggttgctgaagaaaataaaa
gattttgtacaaacggagaaccttgaaacggatactcctggcagagacaagagtcctcct
gctagttgtagtggacaaatttcaaatgagaaaaataatacggccccaattataccagaa
gattttcgctgtcccatatccctggagttgatgagagatcctgttattgtctcaactgga
cagacctatgaacgttcctgcattgagaagtggtttgaagcagggcacggaacatgtcca
aagacacaacagaatctttcaagcactactcttacccccaattatgtgttgcgtagcctt
atagcccagtggtgcgaggctaatggtattgaaccaccaaaacgacccagcagtgatcga
ccatgtagaagctcatcatcttgctcggctgctgaacgcacgaagattgatattctgctc
tgcaaacttgcatctggaaatcctgaagaccaacgatctgcagctggtgagatccgactt
cttgcgaagcggaatgcagataatcgtgttgcaattgctgaggctggtgcaatacctctt
cttgttggccttctttcaactccggattctcgtgttcaagagcatgctgtgacagcactt
cttaacctttctatatgtgaggacaacaagggaagcatcatttcctctggggcagttcct
ggtattgtgctcgtgctcaagaaagggagcatggaagcccgggagaatgctgcagccact
cttttcagcctttcggttgtggacgagaataaagttagaattggtgcctctggagctatc
ccgccgcttgttacgctgcttagccaaggcactcaaagaggcaagaaagatgccgcaact
gctcttttcaacttgtgcatctaccaaggaaacaagggaaaggcagtgagagctggtgta
gttccaaccttgatgcagcttctcaccgaacctggatccggaatggtggacgaagcctta
gccatcttggcaatactctctagccattccgaagggaaagcagtgatcggatctgcaaag
gcggtgccagttttggtagatgttatagggacaggatcccccaggaacagagagaatgca
gctgctgttctcttgcatctctgctctggagatgaacaacacctattagaggccagggag
cttggagtgatgagttcattgatagatttggcacaaaatggcacggatagaggcaagcga
aaagctgcacagttgcttgaacgaatgaaccgactcttagagcacacggaggagactcgg
gtgcaaccaccagagtctcgacctcaaaaccagccatccctatccaactctacgacggaa
gtcgctggtagctga
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