Cucurbita pepo subsp. pepo (vegetable marrow): 111787560
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Entry
111787560 CDS
T05351
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00531
Glycosaminoglycan degradation
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
111787560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpep00536
]
111787560
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
111787560
Glycosaminoglycan binding proteins [BR:
cpep00536
]
Heparan sulfate / Heparin
Enzymes
111787560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
DUF6574
Motif
Other DBs
NCBI-GeneID:
111787560
NCBI-ProteinID:
XP_023523333
LinkDB
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Position
LG02:complement(9601942..9606040)
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AA seq
536 aa
AA seq
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MDIRFSLLFFVVSVSAIWAQDIEHAKIVINANEKVAETDYNFICATIDWWPHDKCDYNHC
SWGYSSVINLNLSHPLFAKAIQAFHNLRIRIGGSLQDQVLYDVGSLKVPCRPFQKISSGL
FGFSKGSLHMNRWDELNHLFTRTGAIVTFGLNALHGRHKIGKIQWGGNWDSSNARDFMKY
TISKGYAIDSWEFGNELSGSGVGASVAAEQYGKDLIQLRSIIDELYRDSSSKPSLIAPGG
FYEQNWYAKLLQVSGSNVVNVVTHHLYNLGPGVDPNLAKKILDPLHLSRVSETFSKLDQT
IKTYGPWASAWVGESGGAYNSGGRDVSNRFINSFWYLDQLGMAAKYRTKVYCRQSLIGGN
YGLLSTGTFVPNPDFYSALLWHRLMGTGVLAVNSDASPFLRSYAHCSKERAGITALFINL
SNQTRFVVSVRNTLTVEVRKIYKRSSFMQGIKRTVSWVGNKASDLSISREEYHLTPKDGY
LQSQTMILNGVPLELTEDGSIPQLNPVLVDVNSPILIAPLSIAFIVFPNFEAPTCK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagattctccttgcttttctttgtagtttctgtatctgctatttgggctcaa
gacatagaacatgctaaaattgtgatcaatgctaatgaaaaagttgcagaaactgactat
aatttcatctgtgctaccattgattggtggcctcatgataagtgtgattacaaccactgt
tcatgggggtactcgtcggtcatcaatttgaacctatctcatcctctttttgccaaggca
attcaagctttccacaatttaaggataagaataggcggctctttacaagaccaggtattg
tatgatgtcggaagcttgaaagtcccgtgccgtccatttcaaaagataagctccgggtta
tttggtttttctaaaggaagtttacacatgaataggtgggatgaactaaaccatttattc
accaggacaggagccattgtgacgtttggcttgaatgcgcttcatgggaggcacaagatc
ggtaaaattcagtggggaggaaattgggactcgagtaatgctcgtgattttatgaaatac
accatttctaagggatatgcgatcgattcgtgggaatttggtaatgaactgagcggaagc
ggtgtaggcgctagtgttgctgctgaacagtacggaaaagacctgatccaactcaggagc
atcatcgacgagctgtaccgtgattccagctcaaaaccatcacttatagcaccgggagga
ttctatgagcagaattggtatgcaaaacttctccaggtttcgggatcaaatgtagtcaat
gtcgtcacacatcatctgtataacttgggtccaggagttgatcccaatctagcgaaaaag
atattggatcccctacacctcagcagagtatcagaaacattcagtaaacttgatcaaacc
atcaaaacatatggtccatgggcttctgcctgggttggggaatctggaggcgcctacaac
agcggtggccgtgatgtatcgaacagatttatcaacagcttttggtacctagatcagttg
ggtatggcagccaagtaccgaacgaaagtctactgtagacaatcattaattggtggaaat
tatggtcttctaagcaccggcacgttcgtaccgaatcctgatttttacagtgcacttcta
tggcatcggcttatgggtactggtgttcttgctgtcaatagtgatgcatctcccttcttg
cgctcttatgctcattgctcaaaagaaagggctggtataactgcattgttcatcaattta
agcaatcagacacgctttgtagtcagcgttcggaacacgttgactgtcgaggtgagaaag
atatacaaaagaagctctttcatgcaaggtattaagagaacagtaagttgggttggaaac
aaggcatcagatttgtccatatcaagagaggagtatcacttgacaccaaaagatggttac
cttcaaagccaaaccatgattctaaatggtgtcccattagagctcactgaagatggaagc
attccacaactcaaccctgttcttgttgatgtgaattctccaatactcatagctccattg
tccattgctttcatagtgttccctaattttgaagctccaacttgcaaatga
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