Cucurbita pepo subsp. pepo (vegetable marrow): 111787913
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Entry
111787913 CDS
T05351
Name
(RefSeq) AP-4 complex subunit epsilon-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111787913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111787913
Membrane trafficking [BR:
cpep04131
]
Endosome - Golgi transport
Others
AP-4 complex
111787913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
INTS1_R4
HEAT_2
HEAT
Cnd1
HEAT_EZ
TOR1L1_N
PDS5
Motif
Other DBs
NCBI-GeneID:
111787913
NCBI-ProteinID:
XP_023523776
LinkDB
All DBs
Position
LG02:complement(3445623..3452985)
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AA seq
982 aa
AA seq
DB search
MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD
IPKRKMKEYIIRLVYVEMLGHDPSFGYIHAVKMTHDDNLLLKRTGYLAVTLFLHEDHDLI
ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
LHRCHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFELITTDVNSYKDLVVSFVSIL
KQVADRRLPKSYEYHQMPAPFIQIKLLKILALLGAGDKQASEHMYTVVGDIFKKCDPLSN
IGNAVLYQSICCVSSIYPNPKLLEAAADVISRFLKSDSHNLKYMGIDALGRLIKLSPDIA
EQHQLAVIDCMEDPDDTLKRKTFELLYTMTKSTNVEVIVNRMIEYMISITDHHYKTYIAS
RCVKLAEEFAPNNHWFIQTINKVFEHAGDLVNIKVAHDLMRLIAEGFGDDGDTVDNQLRS
SAVESYLRIIGNPKLPSAFLQVICWVLGEYGTADGKYSASYIAGKLCDVAEAYSNDESVK
AYAVTALMKVYAFEKMSGRRVDVLPECQSLIEELSASHSTDLQQRAYELQATLGLDAQAV
ENIMPADASCEDIEIDKDLSFLNNYVQQSLENGAQPYIPESQRSRMDDISAIKSLDQREV
VSHSLRFEAYDLPRPPVPSSVPPISPAISAELVPVPEPYHPRETYQSTSDPSVSNDGLTR
VKLRLDGVQKKWGRSTYSSSGSSVSTSTPQKAVNGVSQVDSTSSVSSKPTTYNSRTSEPE
ISQEKQKLAASLFGGSSKTEKRAPSAAHKATKAHHGADKLHAAKKAVTSTEVAVPKASHQ
PPPPDLLDLGEPVVTSSTPFVDPFKQLEGLLDESQVSSTVNSKPVEPNKSPDLMALYSGT
AMSGQGSNFLDLLSSNKDDLNLSSGLSKVAAKTGQGETIVSNSTQFSKGPDAKASLEKDA
VVRQMGVTPTSPNPNLFKDLLG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttgaagacgatcggcagagagcttgctatggggtctcagggaggatttgga
cagtcgaaggagtttttggatctgattaaatcgatcggcgaggccagatccaaggcagag
gaggagcgaattatcattcacgaaatggaaactttgaaacgccgtctcaccgatcccgac
attccgaagcgcaagatgaaggagtacattattcgtctcgtgtatgttgagatgctcggt
catgatccttcattcggctacatccatgccgtcaagatgactcatgacgacaatctcctg
ctgaagcgcactggttatttggccgtcacactctttcttcacgaggaccacgacctcatc
attctcattgttaataccatccagaaagacctgaagtccgataattacctcgtcgtctgt
gcggctctcaatgcggtgtgtaggcttattaacgaggagactataccagcagtgttaccg
caggttgtcgagcttttgggacactcaaaggaggccgttagaaagaaggctatcatggct
cttcatcgctgccaccagaaatcgccctcttccatatcgcatctcctctccaatttccga
aagaggctgtgtgataacgatcctggagtcatgggagccactctttgccctctctttgag
ctcattactacggatgtaaattcctataaagatttagttgtcagctttgtaagcattctt
aaacaggtagctgaccgcagattgccgaagagttatgaataccatcagatgccggctccg
ttcatacagatcaaattattgaaaattcttgcattactgggtgctggcgacaagcaagca
agtgaacacatgtatacagttgttggggatatatttaagaagtgtgatcctttaagtaat
ataggtaatgctgttctctaccaaagtatatgctgcgtctcatctatttacccgaatcct
aagttgctggaagctgctgctgatgtaatctctagatttttaaagagtgatagccataat
ctaaaatatatgggcattgatgcacttggtcgacttataaagctaagtccggatattgcc
gaacaacatcagttagctgtgattgattgtatggaggatccagatgatactttaaagaga
aaaacatttgaactattgtatacaatgaccaagtccaccaatgtcgaagtgattgtcaat
cgcatgattgaatatatgataagcattacggaccatcattataagacttatatagcatca
agatgtgttaaacttgctgaggaatttgcacctaataaccattggttcattcagaccatt
aataaagtttttgagcacgctggagatttggtgaatattaaagttgcacatgatttgatg
cggttgattgctgaaggatttggagacgatggtgatacagtagataaccagttgagatca
tctgcggtggagtcatatttgcgcattattgggaaccccaagcttccatctgcatttctt
caggtcatctgttgggttctgggggagtatgggactgctgatggaaagtactctgcttca
tatattgctggaaagctctgtgatgtagccgaagcctattcaaatgatgaaagcgtcaag
gcttatgcggtgacagctctcatgaaagtatatgcatttgagaagatgtccgggagaaga
gtggatgtgctacctgagtgtcaatctttgattgaagaattatcagcatcccactcaaca
gatttgcagcaacgtgcgtatgaattgcaggccaccttaggcttagatgctcaagctgtt
gagaatataatgccagctgatgcaagctgtgaagatatcgagattgataaagatctatcg
ttcctcaacaattatgtgcaacagtcactagaaaatggtgcacagccttacattcctgag
agtcagcgatctaggatggatgacatcagtgccattaaaagtcttgaccagcgtgaagtt
gtgtcgcacagccttcggtttgaggcctatgatctcccaaggcctccagtgccatcaagc
gtccctcctatttcgcctgcaatctcagctgaattggttcctgtaccagagccatatcat
cctagggagacataccagtctacatcagatccttctgtatcaaatgatggtttgactcga
gtcaagttacgacttgatggtgttcagaagaagtggggcaggtcgacgtactcctcttct
ggttcatctgtgtctacttccactcctcaaaaagcagtaaatggtgtttcacaagtagat
agcactagttctgtaagctcaaaacccacgacttataactcgagaacttcagaacctgag
atttctcaagagaaacaaaagcttgcggcctccttatttggaggttcatccaaaaccgaa
aaaagggcaccttctgctgcccataaagctaccaaggcacaccatggtgccgataagctt
cacgcagccaagaaagcagtcacgtcaacagaagttgctgtgcctaaggcaagccaccaa
ccacctcctcccgacctcctcgacttaggtgaaccggttgtcaccagtagtacaccattt
gttgatccatttaagcagttggaagggcttcttgatgaaagccaggtttcttcgaccgtg
aattctaaacctgttgaacccaataaatctccagatcttatggcattatattctgggaca
gccatgagtggacaaggaagcaatttcttggatcttctatcctccaacaaggatgatttg
aatctttcttctggattgtcaaaagtggccgcaaagacgggtcagggagaaactattgtt
tcgaattcgacacaatttagcaagggaccagatgcaaaggcatctttggaaaaggatgca
gtcgttaggcagatgggtgtgacccctaccagtccgaatccgaacttgtttaaagacttg
cttggctaa
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