Cucurbita pepo subsp. pepo (vegetable marrow): 111787923
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Entry
111787923 CDS
T05351
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111787923
03036 Chromosome and associated proteins [BR:
cpep03036
]
111787923
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111787923
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111787923
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111787923
microRNA pathway
RISC loading complex
111787923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
111787923
NCBI-ProteinID:
XP_023523786
LinkDB
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Position
LG02:9916378..9924027
Genome browser
AA seq
1058 aa
AA seq
DB search
MGRKKRTEGGGERSESQDVGGRGSQGFAERRDFPQQHSGNAYQGGGRGWASQGGRGGQGG
GRGRGTSQHQHYGGPPEYQGRGRGGQYQHGGRSNYGGGNRGGMGSGGIGGGPSSGGPSRP
SVPELHQATPVYQGGVTQPISSVASSSSHPPDTSLLEQQFQQISIQQESAQSQAIQPAPP
SSKSMRFPLRPGKGSTGTRCIVKANHFFAELPDKDLHQYDVTITPEVTSRVYSRAVMEQL
VKLYKVSHLGDRLPAYDGRKSLYTAGPLPFISNEFRITLFDEEDGSGGQRREKEFKVVIK
FAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTSRYSPVGRSFYSPNLGRRQTLG
EGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDMSSRPLSDADRV
KIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFV
IQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPHDREADI
MQTVRHNAYHNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGREKNCLPQVGQWNMM
NKKMFNGGTVNNWMCVNFSRSVQESVTSRFCYELAQMCYISGMAFNPEPVLPPIFARPDH
VEKALKTRYHDAMSILRPQGKELDLLIVVLPDNNGSLYGDLKRICETDLGLVSQCCLTKH
VFKMSKQYLANVALKINVKVGGRNTVLVDALSRNIPLVSDRPTIIFGADVTHPHPGEDSS
PSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKTWQDPVRGTVTGGMIKELLISFR
RATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTR
LFANNHSDRHAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN
KFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDIGSISSDAA
AGRGGVSGARSTRSPSMNAAVRPLPALKENVKRVMFYC
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagaagagaactgaaggtggtggtgagagatcagagtctcaggacgttggt
ggccgtggctcccaaggatttgctgaaaggagagacttcccgcagcaacatagtggcaat
gcataccagggtggggggagaggctgggcttctcaagggggacgtggaggtcaaggtggt
ggtcgtggccgagggacgtctcaacatcagcactatggaggacctcctgaataccaagga
aggggtagaggtgggcaatatcagcatggaggacgcagtaactatggtggtggtaatcgc
ggtggcatgggtagtggtggcattgggggaggaccttcttctggtggcccatccaggcca
tcagttcccgagctgcaccaagcaaccccagtgtatcaaggtggggtgactcagccaatc
tcatctgtggcgagttcttcctcccacccacctgatacctcattgttagaacaacaattt
cagcagatttccattcagcaggaatctgctcaaagccaagcaattcaacctgcacccccg
tctagtaaatctatgagattccctctgagaccaggaaagggtagcactggcacaaggtgt
attgtcaaggctaaccacttctttgcggagcttccagataaagatcttcatcagtatgat
gttactattacgccagaagtcacttcgcgtgtctatagccgagctgtaatggagcagctg
gtgaagttatacaaggtctctcaccttggagatcgtcttcctgcctatgatggaagaaaa
agtttatacactgccggtcctcttcctttcatatcaaatgagtttagaataactcttttt
gacgaggaagatggatcaggaggacaaaggcgggagaaagaatttaaagtcgtaatcaaa
tttgctgctcgtgctgatctacaccatttaggactctttcttcaaggcagacaggctgat
gcccctcaggaagcccttcaagttctggatattgttttacgcgaattgcctacttcaagg
tattcccctgtgggccgatcattttactctccaaaccttggtagacgtcagacactgggt
gaggggctggaaagctggcgtggcttttatcagagtatccgtcctactcaaatggggctc
tctctaaatattgatatgtcatctactgctttcatagagcctttgcctgttatcgacttt
gtgactcagcttctcaaccgcgatatgtcatccagaccactttctgatgctgaccgtgtt
aagataaagaaggctcttcgaggtgtcaaggttgaagtgacacaccgtgggaatatgcgc
agaaaatatcgcatttctgggttgacatcacaagcaacgcgggagctaactttcccggtt
gatgaaagaggtactatgaaatcggtggtggagtacttttatgaaacgtatgggtttgtt
attcaacatactcagtggccttgtcttcaagtagggaaccagcagagacctaactatcta
ccgatggaagtatgtaagattgttgaaggacagaggtattccaaacggctcaacgagaga
cagataactgctctgctcaaggttacatgccaacgaccacacgatagagaggctgacata
atgcagacagtacgtcataatgcatatcataatgatccatatgcaaaggagtttggaatt
aagataagtgagaagcttgcttctgttgaagctcgtattcttcctccaccatggctaaaa
tatcatgacacaggcagagaaaaaaattgtttgccacaagttggacagtggaacatgatg
aataagaaaatgttcaatggtggtactgtaaacaactggatgtgtgtaaatttctctcgc
tctgtgcaagagagtgtcactagcaggttttgttatgaactggctcaaatgtgttacatt
tctggcatggctttcaatccagaaccagtgcttcctcctatttttgcccgtcctgatcac
gtggaaaaggcccttaaaactcggtatcatgatgcaatgagcattctccgaccccagggc
aaggaacttgatctgcttattgttgttttgccagataacaacggatctctctatggtgat
ttaaaacgtatctgtgaaacagatcttgggcttgtttcccagtgctgtttgactaaacat
gtctttaaaatgagtaaacaatatttggccaacgtggccttaaaaataaatgttaaggtt
gggggaaggaatacagtactcgttgatgcattatctaggaacatacccttggttagtgac
cggccgaccattatatttggtgctgacgtaacccatcctcacccaggggaagactcaagt
ccatccattgctgctgttgtggcttctcaagattggccggaagttacaaaatatgctggt
ttggtcagtgctcaagcccataggcaagagcttattcaagatcttttcaaaacatggcag
gatcctgtgagggggacagtgacgggtggaatgatcaaggaactcctcatctccttccgt
agagcaactggacagaaacctcaacgcatcatattctaccgggatggtgttagtgaagga
caattctaccaagttttgttacatgagctggatgccattagaaaggcttgtgcttctttg
gaaccaaactaccaacctccagtgactttcgtcgtggtgcagaagcgtcatcacactagg
ttgtttgctaataaccattctgatcgccatgcagtcgacaagagtgggaatatattacct
ggtacggttgttgactccaaaatttgtcatcctacggaatttgacttctacctgtgcagc
catgctggaatccagggtacaagtcgtcctgctcattaccatgttctgtgggatgaaaat
aagttcacagctgacggattgcagactctaacgaataacctttgttatacgtatgcaagg
tgtactcgctctgtttccattgttcccccagcgtactatgctcatctcgctgcattccga
gctcgcttttatatggaacctgaaacctctgatattggatcaattagcagtgatgctgct
gctggacgtggtggcgttagtggcgctcgcagtacacggtctccaagtatgaatgctgct
gttcgacctttgccagctctcaaagagaatgttaagagggttatgttctattgttga
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