KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111787967
Entry
111787967         CDS       T05351                                 
Name
(RefSeq) RNA-binding protein 7-like isoform X1
  KO
K12831  splicing factor 3B subunit 4
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111787967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111787967
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111787967
 Complex B
    111787967
 Complex C
   U2 SnRNP specific factors
    111787967
SSDB
Motif
Pfam: RRM_1 DUF5032
Other DBs
NCBI-GeneID: 111787967
NCBI-ProteinID: XP_023523852
LinkDB
Position
LG02:complement(8985080..8987737)
AA seq 201 aa
MSGRSNGCTIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDKESGRPRGYAFAEYENEE
ITNYAVKLFSGLVTLHNRTLKFAVSGQDKPSPSSSAITSSSNISHKSRSQIVPGYSNEIS
SYSNRLSNSCRFSAYRENHLEAPPYPGLVNQSNGYGSNSDHHNNQYSQRYSGTNLDSFNH
PKSRRHDTSYPVHYPPYELLN
NT seq 606 nt   +upstreamnt  +downstreamnt
atgtcaggaagatcaaatggttgcactatttacataggtaatttggatgaaagggtaagt
gatagagttctgtatgacattctaattcaagctgggcgggtagtggacttgcacattcct
cgggacaaggaatccggcaggcccaggggttatgcttttgcagaatatgaaaatgaggag
attaccaactatgctgttaagcttttctctggtctcgtgactctacataatcgtacccta
aagtttgcagtatctgggcaagacaagccttcacctagtagtagtgcaatcacttcatca
tcaaatatatctcataaatcaaggtcgcagattgttccaggttattctaatgaaatatct
tcatattccaatcgcttgtcaaactcgtgcaggttttctgcataccgagagaaccatcta
gaagcgcctccttaccctgggttagttaaccaatctaatgggtatggatcaaattcggat
caccacaataaccaatacagtcagagatattctgggacaaatttggatagctttaaccat
cctaaatcacgccgccatgatacgagttatccagtacactatcctccttatgaacttttg
aactaa

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