Cucurbita pepo subsp. pepo (vegetable marrow): 111787968
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Entry
111787968 CDS
T05351
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111787968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111787968
03032 DNA replication proteins [BR:
cpep03032
]
111787968
Spliceosome [BR:
cpep03041
]
Complex A
U1 snRNP components
Sm proteins
111787968
U2 snRNP components
111787968
Complex B
U1 snRNP components
111787968
U4/U6.U5 tri-snRNP components
111787968
Complex C
U2 snRNP components
111787968
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111787968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
NUMOD4
Motif
Other DBs
NCBI-GeneID:
111787968
NCBI-ProteinID:
XP_023523856
LinkDB
All DBs
Position
LG01:4025814..4028978
Genome browser
AA seq
107 aa
AA seq
DB search
MSRPMEEDTNKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL
ENVREMWTEVPKTGKGKKKAQPINKDRFISKMFLRGDSVIIVLRNPK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaccaatggaggaagatactaacaagaatgaagaagaggaattcaacactggt
ccactttcagttctcatgatgagtgttaaaaataacacacaggtactcataaattgtcgc
aacaataagaagcttttgggacgtgtaagggccttcgatcgccattgtaatatggttctg
gaaaatgttagagagatgtggactgaggtaccaaaaactgggaagggcaagaaaaaggct
caacctattaacaaggacagattcatcagtaagatgtttctgagaggagactctgtcatc
attgttcttaggaatcccaagtaa
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