Cucurbita pepo subsp. pepo (vegetable marrow): 111788044
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Entry
111788044 CDS
T05351
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111788044
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111788044
Membrane trafficking [BR:
cpep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111788044
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111788044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
WD40_like
WD_LRWD1
Beta-prop_WDR35_TULP_N
Clathrin
Beta-prop_DCAF12
TPR_1
PH_SPO71
Motif
Other DBs
NCBI-GeneID:
111788044
NCBI-ProteinID:
XP_023523953
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All DBs
Position
LG02:complement(13850994..13860858)
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AA seq
938 aa
AA seq
DB search
MPLRLAIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQIMVKSFEVTELPV
RSAKFIARKQWVVAGADDMLIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPD
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKSSRRVVIGYDEGTIMIKLG
REEPIASMDNSGKIVWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSADGEYAVRESTSKIKIFSKNFQ
EKKSIRPTFSAEHIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNVYWADSGDLVAI
ASDTSFYILKYNRDAVSSCLDSGRPVDEQGVEDAFELLHEVNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVVGYTLLLSLIEYKTLVM
RGDYERANEVLPSIPKEHRNSVARFLESRGMIEEALEVATDLDYRFDLAIQLGRLEIAKE
IAVEVQSEPKWKQLGELAMSIGKLDMAEECLKYAVDFSGLLLLYSSLGDAQGITQLATLA
KEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAAESLADPEEYPNLFDDWQVALSVESRATQDRGVFTSAEEYATLADKPYNTLVEAF
RSMQIEGHLENGDIDHEDTEQNGDEQEEHIAEHSGDEQDKHVAEHSGDGQDKHIAEHNGD
ESQEEGEGIVVDADSTDGAVLVNGSEGDEEWGTNTPSA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgcaatcaagaggaaacttgctcaaaggtcggaaagagttaaatct
gtagacttgcaccctacagagccatggatactggcaagtctgtattctggaaccgtttgt
atctggaactaccagtctcagattatggttaaatcttttgaggtcaccgagttaccagtc
aggtcggccaaatttatagcacggaagcagtgggttgttgctggagctgatgacatgctt
attcgtgtatataactataataccatggacaagataaaagtatttgaggcacacacagac
tacattagatgtgtggctgttcatcctacccttccttatgtactgtcttcgtctgatgat
atgctaataaagctttgggattgggataagggttgggtgtgtactcaaatttttgagggg
cattctcattatgtgatgcaagtaacgtttaatcccaaagacactaacacctttgcaagt
gcatcccttgatcgcacaataaagatttggaatcttggatcccctgatcccaactttaca
ttagatgcccatcagaaaggagtgaattgtgtcgattacttcacaggtggtgacaaacct
tacctcattactggttctgacgatcacactgctaaggtatgggactaccaaaccaagagc
tgtgtccagacacttgatggtcacacacacaatgtctctgcagtctgttttcatccggac
cttccaattataattacaggttctgaagatggaacggttcgcatatggcattccacaact
tataggcttgaaaatacattaaattatggccttgaacgagtttgggcaattgggtacatg
aagagctcacgccgggttgtgattggttatgatgaaggaaccattatgataaaacttggc
cgggaagaacctattgctagtatggacaacagtggaaagatagtatgggctaagcataac
gagattcaaacagtaaacatcaagagtgtgggagcagactttgaggttactgatggagag
agattgccattagctgttaaggagatgggaacttgtgatctttacccacagagcttgaag
cacaatcccaatgggaggtttgttgttgtctgtggagatggtgagtatattatatatact
gctcttgcatggagaaacaggtcatttggttcagctttggagtttgtttggtctgcggat
ggagaatatgctgtgagagaaagtacatcaaagatcaaaattttcagtaaaaattttcag
gaaaagaagagtatcaggcccaccttttcagccgagcacatctatggaggaactctatta
gccatgtgttccaatgactttatttgcttctatgattgggcagagtgcagattgattcga
cgaattgatgtaaatgtgaagaacgtgtattgggctgatagtggtgatttggtggcaata
gccagtgatacgtcattttatatcctgaagtacaatcgtgatgctgtgtcttcctgctta
gatagtggaaggcctgtggatgaacaaggggttgaagatgcattcgagctcctgcatgaa
gttaacgaacgtgtgaggactggcctttgggttggggattgcttcatttacaataactct
tcttggagattaaactactgtgttggtggtgaggtaaccacaatgtttcatttggatcga
cccatgtatttgcttggatatcttgccagccaaagtcgggtctatttgatagacaaagag
ttcaatgttgttggatacacattgcttcttagcttgattgagtacaagacccttgtaatg
cgcggggactatgaaagagccaatgaagtcttaccttcaattcctaaggagcaccgtaac
agtgtggctcgtttcttggaatcacgaggtatgatagaggaagctctggaagtagctact
gatctggattatagatttgatcttgcgatacagcttggtagattagagattgcaaaggaa
attgcggtagaagtacaaagtgagcccaagtggaagcagcttggtgaattggctatgtct
atcggaaagttagacatggccgaggaatgcttgaagtatgctgtggattttagtggcttg
ttattgctgtattcttccctaggagatgctcaagggataacacaacttgcaacccttgcc
aaggagcaaggaaagaacaacgttgctttcctttgtttatttatgttgggtagattggaa
gactgtcttcagttgttggtagaaagtaatcggattcctgaagctgctttgatggctcga
tcttatcttccaagcaaggtatcagagatagtcgcaatttggaggaaggacctgaataag
gttaacccaaaggctgcggagtcattggctgatcctgaggagtatcccaatttgtttgat
gattggcaagttgcactatctgttgaatctagagctacacaggacaggggagtttttact
tcggcagaggagtatgctactcttgctgataagccatacaatacactcgtggaggcattt
aggagcatgcaaattgaaggacatcttgaaaatggagacatcgatcatgaggatactgaa
cagaatggagatgagcaagaggagcacattgcagaacacagtggagatgagcaagacaag
cacgttgcagaacacagtggagatgggcaagacaagcacattgcagaacacaatggagat
gagagccaagaggagggtgagggtattgtggttgatgctgattctaccgatggtgcagtt
ctcgttaatggtagtgagggtgatgaagagtggggtacaaataccccgtcagcctaa
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