KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111788086
Entry
111788086         CDS       T05351                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111788086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpep03021]
    111788086
Enzymes [BR:cpep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111788086
Transcription machinery [BR:cpep03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     111788086
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 111788086
NCBI-ProteinID: XP_023524029
LinkDB
Position
LG02:complement(1706721..1713735)
AA seq 1193 aa
MGTSGAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGETFLKDFCKKSSMAFFNE
YGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKP
KFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDKD
LLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRR
LWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
GVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTSF
PPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAG
ELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAHS
FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPD
GENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENMVDDTSTSLSGKHRIFLNGEWVGVC
EDSLSFVTKVRRKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKSK
GESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSCG
LVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLG
TPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSYK
AEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
ADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLE
SQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDA
ITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL
TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVIQ
RSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC
NT seq 3582 nt   +upstreamnt  +downstreamnt
atggggacatcaggcgcaaaggacgatatagagatgaatagtgagccggaagacttatca
cctggaactgatatggatacagacgatgatgattattctgagccagtcaacattcatgat
ctaggggaaacatttttaaaggatttctgtaagaagtcatcaatggcattttttaatgag
tacggccttatcagtcaccaactcaactcgtacaatgacttcataaaaagtggcattcag
aagtcctttgattactttggtgagatcgtagttcagccaggatatgacccctcaaagaaa
ggagatggagaatggagatatgcttcagtgaagtttggcaaggtaactcttgataagcca
aagttctggggtggagcagcaagtggaaaagagtataacatgcttcctaggcacgctcga
ctacagaacatgacttattcctcaaggatgaaaatgaacattaatgtagaggtgtatact
caaaggttagtcagaagtgataaattcaaaactggacaagatcaatatgtcgacaaggat
ctcttaagtcaagataacagggatatatttataggcaggctgcctgtgatggtgaattct
gacctttgctggatgaaggatgatcagaaacgtgactgcgaatttgatcatggaggttat
tttttaatcaaaggtgcagaaaaaatatttattgctcaagagcaaatttgtttgagaaga
ctctggatttctaataatcaaggttggactgtggcatatagatcagaagttaagagaaat
agactaattattagactagttgaaaattccaagtctgaagaactaaaaagcaaggagaaa
gtcctcaatgtatatttcttgtctacagaaattcctgtgtggattttattctttgcactt
ggtgtttcttcggacagagaaatagtagatttaatcgactttggcagagaggatccaact
gttttgaatattctctttgcctctgttcgtgtagtcgataatgatgataagtggaaagac
tttcgaaggggtaaaagagctctgaattttttggagaatgaggttaaaaagacgagcttc
ccacctgctgaaaaaattgaagattgcttgaacctttatctttttgccagcttgaaaggc
ttaaagcagaagtgtcgtttccttggttatatggttaaatgtctcctgcaagcctatact
ggccgtaggaaatgtgataatagggatgatttccgcaataagaggtttgagttggctgga
gaattgcttgaaagagagattaaagtacatattgcacatgcacgtaggcgtatggaaaag
gctttgcaaagggacctctatggagatcgtgatgtgcgtccaattgaacactattttgat
gcttccataatcactaatggtctatcccgagcattctctactggagcatgggcacattca
ttcaagaggatggaaagaatttcaggtgtggtagcaacgcttggtcgtgctaatcccctg
cagacaatggctgaattgaggagaacacgtcaacaggttgcatacactgggaaagttggt
gatgctagatacccgcatccttctcactggggaagggtttgctttctctccaccccggat
ggtgaaaattgtgggcttattaaaaatttgtccatcacaggacttgtaagcttaaacaca
ttgaagcccgtagttcccaccttgtttcgttgtgggatggagaatatggtggacgataca
tctacttctcttagtgggaagcacagaatttttctcaatggggaatgggttggagtttgt
gaagattccctttcatttgtaacgaaagtgagacgcaagaggcgaaggaatctgttactg
catcaggtagaagtcaaaagagatgaacaactgaaagaagtacgtatattttccgatgct
ggaaggatattacgtcctctcttagttgtagagaacttaaacaggattgataagtctaag
ggggaaagctacacttttcaatcccttttggacaagggaataattgaacttattggaact
gaagaagaagaagactgtcgtacagcttggagtattaagcatcttacggaagatcaaggg
acttcgaaatatacccattgtgaactggatacgtcatttttattaggtttaagctgtgga
cttgtcccttttgcaaatcatgaccatgctaggagggctctatttcaatcccagaaacac
tctaatcaagctattggattttcaacaaccaattctaattttcgtgtagatactttatct
caccagttacactatccacaaaggccgctttttcgtactatgactgctgattgccttggg
acacctggatacctgtcatctcacactggtatactaccaaaacccgagttctataatggt
cagaacgctattgtggcagtcaatgttcacctgggttacaaccaagaagattcattagta
atgaaccgggcctctctggagcgtggcatgtttcggtctgagcatactcggagctacaag
gctgaagttgataataaagaatcttccgaaaagaggaggaaatccgatgatgcaataaat
tttggtaagactcaaagtaaaattggaagagttgacagcttggacgatgatggcttccct
tacatcggtgcaaacttgcaaagtggagacattgtcattggtagatgtgcagaatctggg
gccgatcacagtatcaaactaaagcacactgagaagggtatggttcagaaagttgtgctc
tcttctaatgacgatggcaagaattttgctgttgtaagcctgagacaggttcgttcacca
tgtcttggagacaagttttccagtatgcatggacaaaagggagttctgggctttttggag
tctcaagagaatttccccttcaccattcaggggatcgttccagatatcgttattaacccg
catgcttttccttcacgacagactcctggtcaattattggaagctgctctagggaaaggg
attgcttctggcggttcgcttaaatatgcgactcctttttccactccttctgttgatgcc
attacagaccagcttcacagggcagggttttcaagatgggggagtgagagagtgtacaat
ggccgaactggtgaaatgatgcgctcactcatattcatgggtccaacattctaccagcgc
ttaattcacatggctgaagacaaggttaaatttcgtaacactggacctgtccaccctctc
acacgacaaccggttgcggacaggaagcgttttggtggaatcaaatttggggagatggag
cgtgactgtcttatagctcatggcgcctcggccaacttacacgaacgcttgtttaccctc
agtgactcctcccagatgcacgtttgtcagaaatgtaaaaatgttgcaaatgtgatccaa
cgatcggtggcaggtggtcgtaagataaggggtccatactgtcgtgtttgcgagtcggtg
gatgacattgtgagagttaatgtaccgtatggagccaagttgttgtgccaggagctcttc
agcatgggcatcaatctcaagtttgaaacacaggtgtgttga

DBGET integrated database retrieval system