Cucurbita pepo subsp. pepo (vegetable marrow): 111788205
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Entry
111788205 CDS
T05351
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111788205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111788205
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
111788205
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111788205
NCBI-ProteinID:
XP_023524242
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Position
LG02:complement(1483246..1486919)
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AA seq
390 aa
AA seq
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MESSLSGDSGPISELGPSHSLPAGPHRFPLAAQPEIMRAAEKDDQYASFVYEACRDAFRH
LFGARIAVAYQSETNLLGQMLYYVLTTGSGQQTLGEEYCDINQVSGPYGLPPNPARRALF
IVYQTAVPYIAERISSRVASRGIMLADSLSDEFYGDNASSRSLLNMEIQPSSTPEYSGSY
LTRVKAKINRLWLQTVRCWPSILPLVREFLQLALRTNLMFFYFEGLYYHISKRAAGIRYV
FIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSSLSSVSSSINPTSFGANPSSSGRGLP
ILNEEGNLISVDGDSGNLVSDPSHSESNRGSGISKCTLCLSNRQHPTATPCGHVFCWNCI
MEWCNEKPECPLCRTPINHSTLVCLYHSDF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccttatcgggggactcaggtcccatctcagaacttgggccctcgcattcc
ctgccggccggacctcaccgttttcctcttgcagctcaaccggagattatgcgagcagca
gagaaggatgatcagtacgcctcttttgtttatgaagcttgtcgcgacgctttccgccac
ctctttggcgctcggattgccgtagcatatcagagtgagacaaatctccttggacagatg
ttgtattatgtgttaacaactgggtcaggacaacaaacacttggtgaagagtattgtgat
atcaatcaggtttctggaccttatggacttcctccaaacccagcaagacgtgctcttttc
attgtgtaccagacagctgttccatatattgctgaaagaataagctctagagttgcttct
cgtggtatcatgcttgctgattctctgtctgacgagttctatggagataatgcctcttct
cggtctttattaaacatggaaatccaaccttcttcaaccccagagtattcgggttcttac
ctaacgagagtgaaggcgaaaattaatcgattatggctgcaaacagtgcgatgctggcct
tcgattttgcctctagttcgtgaatttttgcaattggctcttcgtacaaacctcatgttt
ttctattttgaaggactgtactatcatatatccaaacgagctgcaggcattcgctatgtg
ttcattggaaaaccatctaatcaaaggcccagataccaaatacttggagtgtttctactg
attcaactttgtatcattgctgccgaaggcttaagacgtagtagtttatcatctgtttca
agttcaattaacccgacatcctttggagcaaatcctagttcatcaggtcgtggtctgcca
attttaaatgaggaaggcaatctaatatctgttgatggggactctggaaatttggtctct
gatccttcgcacagtgagtctaatagaggtagtggaataagcaaatgcacgctgtgtctg
agtaatcgccaacacccaactgccacaccttgtggccatgtattctgctggaactgcata
atggaatggtgcaatgaaaaacctgaatgcccgctgtgcagaactcccattaatcattca
accttagtttgtctatatcattctgacttctga
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