KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111788223
Entry
111788223         CDS       T05351                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K11418  histone deacetylase 11 [EC:3.5.1.98]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpep03036]
    111788223
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111788223
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class IV HDACs
     111788223
SSDB
Motif
Pfam: Hist_deacetyl DUF6764
Other DBs
NCBI-GeneID: 111788223
NCBI-ProteinID: XP_023524271
LinkDB
Position
LG02
AA seq 345 aa
MSSDDAETVRRDRILSSKLYFDVPSSKVPVIYSSSYNISFLGIEKLHPFDSKKWGRVCQF
LVAAGVIRKDQIIEPLEAKMNDLLVVHTESYLNSLKNSLNVAKIIEVPPVALFPHCIVKE
KVERPFRNQVGGSILAAKVAKGRGWAINVGGGFHHCSAERGGGFCMYADITLCIHYAFVQ
LNISSVMIIDLDAHQGNGHEKDFSHDSRVYILDMFNPEIYPFDYEARRCINQKVEVVSGT
RTSEYLKKLEEALEVASTSYDPELIVYNAGTDILDGDPLGLLKISADGIARRDEKVFRFA
RARRIPIVMLTSGGYMKSSAKVIADSIENLSKQNLIDTGSTPGRM
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtcgtcggacgatgcggaaactgttcgaagggatcggattctctccagcaagctgtat
tttgacgttccttcttcaaaggttccggtgatatattcttcatcgtacaacatctcattt
cttggaatagaaaagttgcatccatttgattcgaagaaatggggtcgcgtatgccaattc
cttgttgccgctggagtaataaggaaagatcaaatcatcgagcctttggaagctaaaatg
aacgatcttcttgtggtacatactgaatcgtacctgaatagtttgaagaacagtttaaac
gttgccaagattattgaggtccctcctgttgcgttgtttcctcattgtattgtcaaggag
aaagttgaacgtccatttcgtaaccaggttggagggagtatattagctgcaaaagtagca
aaggggagaggatgggctatcaatgtaggaggtggttttcaccattgttcagcagaacga
ggagggggattttgtatgtatgcagatattactctgtgtatacactacgcctttgttcag
ctaaatatatcaagtgtaatgattattgatcttgatgcccatcaaggaaatggccatgaa
aaggatttttcccatgatagccgagtatatattcttgatatgttcaatccagaaatatat
ccatttgattacgaggctaggcgatgcattaatcagaaagttgaagtcgttagtgggacc
agaactagtgaatacttgaagaaattggaagaagcacttgaggttgcttccacttcctat
gatccagaattgattgtttacaatgctgggactgatattctagatggagatcctctgggt
ttgttgaagattagtgctgatggaatagctagaagagatgaaaaggttttcagatttgct
cgtgcgaggagaattcccattgtaatgctaacatcaggcggttacatgaaatctagcgct
aaagtcattgctgattcaatcgaaaatctctcgaagcaaaatttaatcgatacaggaagt
actccaggcagaatgtag

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