Cucurbita pepo subsp. pepo (vegetable marrow): 111788263
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Entry
111788263 CDS
T05351
Name
(RefSeq) replication protein A 32 kDa subunit A-like
KO
K10739
replication factor A2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030
DNA replication
cpep03420
Nucleotide excision repair
cpep03430
Mismatch repair
cpep03440
Homologous recombination
cpep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111788263
03420 Nucleotide excision repair
111788263
03430 Mismatch repair
111788263
03440 Homologous recombination
111788263
03460 Fanconi anemia pathway
111788263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpep03032
]
111788263
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111788263
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111788263
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111788263
MMR (mismatch excision repair)
111788263
DSBR (double strand breaks repair)
HR (homologous recombination)
111788263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
TrmB
DDRGK
Phage_int_SAM_5
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
111788263
NCBI-ProteinID:
XP_023524340
LinkDB
All DBs
Position
LG02:complement(2313202..2317896)
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AA seq
271 aa
AA seq
DB search
MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI
TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL
KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA
VQSGSSGYQTASSGLSSQQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIP
LEKIVDSIRSLEDEGLIYSTIDEYHFKSAAA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgttctccagcagccagtttgattccggcagtggatttacgtcgtctcagaccaatgac
tcctctttgtcgaagagtcgagaaacgccgggcgtggttccagtaacggtaaaacagata
agtgaagcctcccattctggcgaagagaaggccaactttgtgatcaacggcgtcgatatt
acaaatgttacaatcgtcgggaaggtctctgagaaagctgaaaggaatactgacatcaca
ttcattgtagatgatggaacaggaagaattggctgcaaaagatgggtaaacgatactttt
gacactaagcaaatggatgaaatacaagatggaatgtatgtacgggtaattgggcatctg
aaaatatttcaaagtaacaagcaaatatttgcattctctgtaaggcctgttacaaatttt
gacgagattaccttccactttattgaatgcatacatgaccacttgcggaattccaagtta
cagcccaatggagatgtatcgacacagttccaatcctcggattcatctgtgaagcctgca
gtgcagagtggctcgagtggatatcagacagcatcttcaggactatcgtctcagcagcac
actgttgatgttaaaaagaactgtgacgaattggtccttgactatctgcagctgccctcc
agcgttgcaaaagaaagaggaatacacagagatgaactgtcccaacaactgaaaattcca
ttggagaaaatagtggactccataaggtctcttgaagatgaaggtttgatatattccacc
atagatgagtatcatttcaaatctgctgctgcatag
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