Cucurbita pepo subsp. pepo (vegetable marrow): 111788276
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Entry
111788276 CDS
T05351
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111788276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111788276
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111788276
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
111788276
NCBI-ProteinID:
XP_023524364
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Position
LG02:1218328..1219700
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AA seq
229 aa
AA seq
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MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFI
TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC
GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSL
VYPTYSSNGLSTPVAGYETADGRRKVEPPSRAQKNMSADAVPFHAKDKA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatggtactaggatggaagatcaatttaggggcagaaagatttttgttggagga
ttatcggctgaattgactgaagatgacttcaaaaattactttgaaaagtttggtcgggta
actgacgtagtcgtgatgcgtgatagtgtaactaaacgccctagaggatttggatttatc
acgtttgattctgtacaatccgttgactctgttcttcaaaataactttcatgagttaaat
ggtaggcgtgtggaggtgaagagagccatcccaaaaaaggggaactacaatggcggccat
atttccaaaagccctctttctgaaagcaatgttcttccctcttacccatattatagctgt
ggttatacagtttatcctggttttacaccttttccaccttatggaccaggttttggttta
tatggctcagacccctatgggaattggttttcccccagctttggtcccatggcttcacca
gctgcatggtatgctccaaatttctttggaatgtttcctccacctcataaaaattctcta
gtttatccaacgtattcaagcaatgggctatctactccggtggctggatatgaaactgct
gatgggagaagaaaggttgagcccccctctcgtgcacagaaaaatatgtcggctgacgca
gtgccatttcatgctaaggataaagcttga
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