Cucurbita pepo subsp. pepo (vegetable marrow): 111788311
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Entry
111788311 CDS
T05351
Name
(RefSeq) transcription factor HY5-like isoform X1
KO
K16241
transcription factor HY5
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111788311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111788311
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
111788311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
GIT_CC
TSC22
Macoilin
Motif
Other DBs
NCBI-GeneID:
111788311
NCBI-ProteinID:
XP_023524405
LinkDB
All DBs
Position
LG02:complement(2612736..2616376)
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AA seq
163 aa
AA seq
DB search
MQERTAAVASAGRTRSSSERSSSSAFLLDVKEDIGVGSDEEETSRVPQICGNSASAAGGT
SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQAV
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacgaaccgccgccgtcgcctccgccggtcgtacgcgatcgagcagcgaaaga
tcgtcgagttccgcgtttctacttgatgttaaagaagatataggagtgggaagtgatgag
gaggagacaagcagagtgccgcagatctgcggcaactctgcctctgcagccggcggcact
tcagcgtctggtaaagcccctgcatcagatggcgtaaggagcagaggacgaagctccgct
gacaaagaaagtaaaaggcttaagagattgttaagaaacagagtttcagcacagcaagca
agggagaggaaaaaggcgtatttgggcgacttggaaattcgagcagcaaacttgttgaaa
aggaactccgagcttgaagagaatctgtccacgttacaaaatgagaatcagatgcttaga
cacatactaaagaacacaacaaccaacaagagaagtgatggggacactgctaatgcaaac
caggctgtatag
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integrated database retrieval system
