Cucurbita pepo subsp. pepo (vegetable marrow): 111788366
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Entry
111788366 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111788366
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111788366
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111788366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111788366
NCBI-ProteinID:
XP_023524452
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Position
LG02:7730477..7741734
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AA seq
185 aa
AA seq
DB search
MDGPPAGDICSICHGRFNTPCQANCSHWFCGRCIMLVWDHGSPLQPCKCPLCRRQITLLV
PSEASATQQSDPEVARVLNNIRNYNRHFGGNSTGLNQRLQDLPFLLRRLLRELLNPQRSL
PLVIRARVYTAMFLSVVYTVSPIDIIPEALLGLFGLMDDAFILLICFLYVAALYRSVLHN
RHGGT
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacggcccccctgcgggcgatatctgttcgatctgccatggaagattcaacacccct
tgccaagctaactgctcgcactggttctgcggaaggtgcataatgcttgtttgggatcat
ggatcaccgctgcagccatgtaaatgccccttatgtcgccgacagatcactttattggtt
ccttctgaggcttcagcaacgcagcaaagtgaccctgaggttgctcgtgttcttaacaat
ataaggaattataaccgtcattttggtggcaactcaactggtttaaatcagcggctgcaa
gaccttccttttctcttacggagattgcttcgggaactcctcaatccacagagatctctt
cctcttgtcattagagcacgtgtttacactgcaatgtttctaagtgtagtctacactgtg
agtcccatcgatatcatacccgaagcattactagggttatttggactgatggatgatgcc
tttatactgctcatctgcttcctttatgttgctgctttataccgatcggtactccataat
cgccatggaggaacttga
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