Cucurbita pepo subsp. pepo (vegetable marrow): 111788381
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Entry
111788381 CDS
T05351
Name
(RefSeq) probable ribonuclease P/MRP protein subunit POP5
KO
K03537
ribonuclease P/MRP protein subunit POP5 [EC:
3.1.26.5
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111788381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111788381
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111788381
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111788381
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
111788381
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
111788381
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
111788381
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
111788381
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_Rpp14
Pop8
Motif
Other DBs
NCBI-GeneID:
111788381
NCBI-ProteinID:
XP_023524475
LinkDB
All DBs
Position
LG02:7424061..7425826
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AA seq
154 aa
AA seq
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MVSFKNRYLVFEVALDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV
RYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRACKNTALRVDE
LKFEQYKLMVGPNISDGVNLQMHNCLEKIRTLDN
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttttaagaaccgatacttggtgtttgaagttgcgttggatcccaataaagac
gttgcaacagatgatcctattatcattacccaatataatgtttcaaaagcaatcaaggac
agtattcttctcaacttcggggagtgtggctttgcttcctcacttggatcttttcaagtt
aggtatgtaaatccaatcacaaagctgtgcatcattagagcctctagagaggactaccag
aatgtatgggctgcaattacaatggtgaggagtatcagcaattgccccgttgtatttaat
ctactggacctaactggaaacagcagggcttgcaagaacaccgccttgagggtggatgaa
ctgaaatttgagcagtacaagcttatggttggacctaatatctctgatggcgtcaatctg
caaatgcataactgtctggagaagattagaactttagataactga
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