KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111788401
Entry
111788401         CDS       T05351                                 
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
  KO
K11091  U1 small nuclear ribonucleoprotein A
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111788401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111788401
Spliceosome [BR:cpep03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    111788401
 Complex B
    111788401
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_YTH1 DUF4523 xRRM
Other DBs
NCBI-GeneID: 111788401
NCBI-ProteinID: XP_023524504
LinkDB
Position
LG02:complement(12870514..12873438)
AA seq 242 aa
MAEVNSTGNEIPPNMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQA
WVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVISKSDGTFVPREKRKRHEEKGR
KKKEQHDANQAGMGMNPAFGGAYGATAHSQVPYSGGVMVPEAPAPPNSILFVQNLPHETT
PMMLQMLFCQYPGFKEVRMIEAKPGIAFVEYADEVQSTVAMQALQGFKMNPQNSMLITYA
KK
NT seq 729 nt   +upstreamnt  +downstreamnt
atggcggaggtcaacagcactggcaatgagattcctccgaacatgaccatctatattaac
aatctcaacgagaaaatcaagctggaagaattgaagaagtcgctgaacgcggtgttctcg
cagttcgggaagattctggaagtattagctttcaaaaccttgaagcacaaaggacaggct
tgggttgtcttcgaagaagtatcgtctgccactaatgcgcttagacaaatgcagggcttt
cctttctatgataagcctatgaggatacaatatgcaaagacgaaatcggatgttatctcg
aagtctgatggtacatttgttccccgggagaaacgaaagaggcacgaggagaaggggagg
aagaagaaagagcagcatgatgctaatcaagctgggatgggtatgaatcctgcttttggt
ggagcatatggtgcaacagcgcactctcaagtaccttattctggtggagttatggtgcca
gaagcaccagccccacccaatagcattttgtttgtacaaaatcttccccatgaaacgact
ccaatgatgctacaaatgctgttctgtcagtaccctggttttaaggaggttcgtatgatc
gaagcaaagccaggtattgcatttgtagagtacgccgatgaggtacaatcgacagtcgcc
atgcaagcgctacaaggtttcaagatgaacccgcaaaactcgatgttgataacttatgca
aagaaatag

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