KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111788538
Entry
111788538         CDS       T05351                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111788538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111788538
   03041 Spliceosome [BR:cpep03041]
    111788538
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111788538
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111788538
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111788538
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 111788538
NCBI-ProteinID: XP_023524648
LinkDB
Position
LG02:4256840..4263652
AA seq 439 aa
MDVVKKRKMDENGVPLTDSDDSLLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA
VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF
KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL
LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN
DGKKGKPGGSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGGPGGLGSYGGFSG
GLHGPPQLGHNTLNSSLGPGLSSMGSQTQNSLNGTGGYGGGLGGGPYGGGYGGPGPTGFS
GLSAGPAGGQGSSGAGTGSGLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNQHPHTTGT
SPAPRVPPGGMYPNVPPFY
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggacgtcgttaagaagcgaaagatggacgaaaacggcgtccctcttaccgactccgac
gattctttgttaaaactttcaccggaagatgctcgcaagatcatcgaacggttcactccg
gatcaactcatcgacattcttcaagacgcggtttcctgtcattcggatgtgcttgacgca
gtacgttctgttgctgatcaagatgttgctcagcgtaagctctttattcgtgggcttggt
tgggacactacgaccgatggtctccggaagcttttttctatatatggcgaattggaagag
gccgtcgttattttagataaggccacggggaagtcgaaagggtatgggtttgttacgttt
aagcatgttgatggtgctctactggctttgaaagagccgagtaaaacgattgatgggcgt
gtcactgtgactcaattggcagctgcaggaaatactgggtctaactccaacgcccccgat
gtgtcgatgaggaaaatttacgtggctaatgtgccgattgacatggctgctgataaattg
cttgcgcattttgttctgtacggggagattgaggaagggcctttggggttcgataagcag
acggggaagtgtaggggttatgcattgtttgtctacaagaaggcggagggtgcacaagcg
gcgttggtggatccgattaagactattgaagggcgacaagtaagctgtaaatatgccaat
gatggaaagaagggaaagcctggaggttctgggcctgatggcgttcagggctctgttggt
aatcaaggtaatgttcatggagatgggatgggtatgccttcgcaggctccgatgcctggt
tcaatgggtggacagtatgggggacctggcggtcttggatcatacggtgggttttcagga
ggtctccatggtccaccacagcttgggcataatacgctgaactcgtcgttgggaccaggc
ttgtcttctatgggtagtcaaacacaaaattctctgaatggtactggtgggtatggtggt
gggcttggcggcggcccttacggtggtggatacggtggtcctgggccaactggcttttct
ggtctgagtgctggtccagccggcggccagggaagttccggtgctggaacgggatctggt
ttgtacaggttgcccccgaattctgggggagttccttctaatggttatccagatagtttg
ccatatagtttgtcgtcttcgtctggttatctaaatcagcacccacacaccacgggtaca
tcaccggcgccccgagtgccgcctgggggcatgtaccctaatgtgccgccattttattga

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