Cucurbita pepo subsp. pepo (vegetable marrow): 111788577
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Entry
111788577 CDS
T05351
Name
(RefSeq) fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111788577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111788577
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
111788577
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
111788577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
FANC_SAP
RA_3
RLL
Motif
Other DBs
NCBI-GeneID:
111788577
NCBI-ProteinID:
XP_023524722
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All DBs
Position
LG02:complement(9464648..9476302)
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AA seq
945 aa
AA seq
DB search
MLRGRESLVRLVGKRRRFLPNRLSLLSSPVENTLNLCSDEDCKPLPVVRTPDAHKDGDTE
TSSSGKYVTCPVCSSRVNGEDSIINSHLDACLSRGTKRKLTQSSLLQLNFYSRPKVQHHS
HVLKFEKNESSVSPDDGPVDIVHRLPKDASYNENDKIKCGSLEECAMQPQRDCLLDTLNN
SERTNGATEIYSPMNKGATSGMVTTTKDDLSGMILETFIVGRKFSDENELNLGASISLER
DPTNVKDPNAIKVISEDSGCCKTLGFLPRELAKFLSPLIGKYCLSFKGFVTTAPRSSVDV
VPIEVMCDNINLLDEKNCDVEFKNLWTSIQQAIDSMKNFTPNALKYQKNFSLLIQEVLQG
YSHLLSDEENHFLDVFNSLSDDSQRLFIRLYMRKGPWFRMSSTSYKEVLDSKQAVKELSE
AGYLCCFDTNDADNTDMIQILNLLTVSELREVMSMLKKNCSSSMRKDDLVASLLPPYKDG
LCLPLPDLILGSIGICVRISSKAELLIWRAERLFFLNGEQDLSAFLLVDMGIVKYPTYSC
IISDQIFLDRNDLLAYEEAIEVAQLIDEALDEKDNKMVLRCVSVANSRVKPNQCTTSESV
PFFSFFTASWIYSKVLSLGVSFLERENRYNDAVILLKRLLSCNTPDGRRGYWTLRLSIDL
EHLGYPNESLSVAENGLLDPWVRAGSRMALQRRILRLGKPPRRWKTPSFAESIKRKITEV
HVQGRPLNRETGMKSRFYGESGDQCSVEQLALEYYNGEGGGWLGVHSESGIWLTIFGLLM
WDVIFSDVPNVFRTKFQTAPLDFGTDSFYLLRQNSIESQLLKIQDGMGEEILITSWESHK
GTACSGVNWDRHSLAELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYS
GEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFITEICKITPMPKSA
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaggaagagaaagcttggtccgattggtagggaaacggagacgcttccttcct
aatcgtctttctctcctctcctctccagtcgagaacactttaaatctctgctctgatgaa
gattgcaagccccttcctgttgtgagaactccggatgctcataaagatggggacacggaa
accagtagctctgggaaatatgttacttgcccagtttgcagcagcagagtaaatggggaa
gactccattatcaactcccatctggatgcatgcttatctaggggaacgaagcggaaattg
acacagagctctcttcttcaattaaacttctattcccgaccaaaagttcaacatcattct
catgtgctgaaatttgagaaaaatgagtcttctgtgagtcccgatgatggtcctgtggac
attgtccatagattgcctaaagatgcgtcctataatgaaaatgacaaaattaaatgcggt
tcgttagaagaatgtgcaatgcagccacaaagggactgtttactggataccttaaataat
agtgaaagaactaatggtgctacagaaatttattctcccatgaataaaggagctacatct
gggatggttactaccaccaaggatgatttatctgggatgattcttgaaacttttattgtt
ggtcgtaagttcagtgatgaaaatgagttaaatcttggggcaagcatctctcttgaaaga
gatcccaccaatgtaaaggatcccaatgccatcaaggttatttctgaagattctggatgt
tgcaagacgcttggatttctcccacgtgagttagctaagtttttgtctcccctaattggg
aagtattgcctaagctttaagggatttgtgacaactgctcccagaagttctgttgacgtt
gttcccatagaggtcatgtgtgacaacatcaatttacttgatgagaaaaattgtgatgtt
gagttcaaaaatttatggacaagcattcagcaagcaattgattcaatgaagaatttcaca
cctaatgcattgaaatatcagaagaacttttctcttttgatacaagaagttttacagggt
tactcccatttgttgtctgatgaagaaaatcattttctagatgtattcaattcactatca
gatgatagtcagaggctctttatccggctttatatgcgtaaaggaccatggtttcggatg
tcttctacatcatataaagaagtattggattctaaacaggcagtcaaagagctctcagaa
gcagggtatctatgttgctttgatacaaatgatgctgataacactgacatgatccagatt
ttgaatcttctcactgtctctgagctccgtgaagtcatgtccatgcttaagaagaattgc
agtagcagcatgagaaaggatgatcttgttgcctctcttttgcccccctacaaagatgga
ctgtgtctaccacttccagatctaattttgggctcaattggcatctgcgttaggatatcc
tctaaagctgaattgcttatctggcgtgctgagaggcttttcttcctcaatggagagcag
gatttgtcagcctttctgcttgttgatatgggaatagtcaagtatccaacttacagctgc
ataatttcagaccagattttcttggatcgaaatgatttgcttgcttatgaagaggccatt
gaagttgcacaactaattgatgaagctcttgacgagaaggacaacaaaatggttttaaga
tgtgtatcagttgctaactcgcgtgtgaagccaaatcagtgtactacctctgaatcagtt
ccattcttttcattctttacagcatcatggatctattcaaaagtattgtctcttggagtt
tcctttcttgagcgtgagaataggtacaatgatgcagtaatactacttaagcgattgcta
agttgtaacactcctgatggaagaagaggatattggaccttgaggttgtcaattgatttg
gagcatttgggctatcccaacgagagtctgtcagtagctgaaaatggattgttagatcca
tgggttcgagctggttcaagaatggcattgcaaaggcgcatccttcgcttaggaaaacca
ccacgtcggtggaaaacccctagttttgctgagtctataaagaggaaaatcaccgaggta
cacgttcaagggcgaccattgaaccgtgaaacaggtatgaagagcaggttttatggagaa
agtggggatcaatgttcagttgagcagcttgcactcgagtattataatggggagggaggt
ggatggctaggtgttcattcagaaagtggcatttggttaaccatttttgggcttctcatg
tgggatgtcatattttccgatgtcccaaatgtttttcgtacaaaatttcagactgctccc
ctggattttggaacagatagcttttatttattgagacagaatagtatagagtcccaacta
ctgaaaattcaagatggcatgggcgaagagatcctcattacgtcgtgggaatcacacaag
ggaacagcctgtagcggagttaactgggaccgacactcactagccgagcttcgggcagct
gtgacatgcattggtggcccttgtatggcttcactctgtcggcatcttgcgcaagattat
cgaagttggtcgagtggaatgccagatttgttgctatggcgctttaacagtgaatacagt
ggtgaagctaaacttgttgaagtaaagggtcccagagacagactgtctgaacagcagagg
gcatggcttttgcttctaatggattgtggcttcattacagagatctgcaaaatcaccccc
atgcctaaatcagcttaa
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