Cucurbita pepo subsp. pepo (vegetable marrow): 111788764
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Entry
111788764 CDS
T05351
Name
(RefSeq) probable DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111788764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111788764
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
111788764
DNA repair and recombination proteins [BR:
cpep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111788764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
111788764
NCBI-ProteinID:
XP_023525023
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Position
LG02:complement(609828..612952)
Genome browser
AA seq
370 aa
AA seq
DB search
MGEQTQVQVQTQTQSQAQNALHESSNSTTFIAQATIALSEVMNAPSQTSSLPSKMPLRPR
KIRKLSPAESDPNSSQIVTIPDGPKPIVTGKSHKSKTAQQRAAFASAPVLPARSLSCEGE
VEIALRHLGNADPLLAPLIDLHQRPTFDSFQTPFLALTRSILYQQLAYKAGTSIYTRFIA
LCGGDAGVLPETVLALNTQQLRQIGISGRKSSYLHDLARKYQNGILSDTAIVNMDDKSLF
TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLNVRKGVQLLYNLEELPRPSQMDQLCEK
WRPYRSVGSWYMWRLAEAKGASSSAAAVAVGASLQLQQQEHQQEQQHQRQPQLLDPLNSI
LNLGACAWGQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcaaacgcaagtgcaggttcagactcaaacgcaatcgcaggctcagaacgcg
cttcatgaatcctccaactctacaacctttattgctcaagccactatagcactaagcgag
gtgatgaatgcgccatcgcaaacctcttctctgccatccaaaatgcctttgcgtccacgg
aagattcggaagctctcgcccgctgaatcggatccgaattcctctcagattgtcaccatt
ccggatgggccgaaacctatcgtcaccgggaaatctcacaagagcaagacggcccaacaa
cgcgccgccttcgcgtctgctccagtgctgccagcccgatcactttcctgtgaaggcgag
gtggaaatcgcgcttcggcatcttgggaatgcggatccgctccttgcacctttgatcgac
ctccatcaacgtcctaccttcgacagttttcaaaccccattccttgccctaactagaagt
atcctatatcagcagctggcttacaaagctggcacatctatttacacccgttttatcgcc
ctttgtggcggcgacgctggtgttcttcccgaaaccgttcttgccttgaacactcaacag
ctcaggcaaattggaatttcgggtcgtaaatctagttatcttcatgaccttgctaggaaa
taccaaaatgggattctttcagacacggcaattgtaaatatggatgataaatcgcttttc
acgatgctcacaatggtgaatggaattgggtcttggtctgttcatatgttcatgattttc
tcgctgcacagaccagatgtgcttcctatcaacgatcttaatgttcgcaaaggtgttcag
cttctctacaatcttgaagagttgcctcgaccatcacaaatggatcagttatgcgagaag
tggaggccgtatcgatcggttgggtcctggtatatgtggaggcttgctgaggcaaaggga
gcttcttcgagcgcagcagcagtggctgttggtgccagcttacagctgcagcaacaagag
caccagcaggagcaacagcatcaacggcagccgcagcttcttgatccactcaatagcatt
ctcaatcttggggcctgtgcttgggggcagtga
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