Cucurbita pepo subsp. pepo (vegetable marrow): 111788900
Help
Entry
111788900 CDS
T05351
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111788900
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
111788900
TFIIIC, fungi type
111788900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_1
TPR_9
TPR_16
TPR_12
TPR_6
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_7
ARM_TT21
TPR_Slam
ARM_TT21_N
ANAPC3
Alkyl_sulf_dimr
NatA_aux_su
ChAPs
TPR_10
TPR_MalT
Suf
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
111788900
NCBI-ProteinID:
XP_023525239
LinkDB
All DBs
Position
LG02:14136434..14149531
Genome browser
AA seq
937 aa
AA seq
DB search
MEEEGNTISDNEEVPGCDVRGKRVVETEVEDREEEEEEEEEEEDEEEVEDEGEDDNEEED
GYIFKFKAGENPFDFVEGTDFSIQPYKKFERLEYEALAEKKRKALANGQSERSAKRGRVE
DISGASFEEIMEAMNYGSRRKRRQPKKRGRRKGSKRKLNCDVTKLLGDATLCYAQGQYEK
AISVLSQVVLQAPDVPDSYHTLGLVYNAIGDDVKAMGFYMLAAHLMPKDSSLWKLLFSWS
IDRGDIDQASYCLSKAIKAEPDDINLLFYRASLYLERGDCQKAAETYDQIHQLSVENVEA
LMTGAKLYQQCGHLERAICILENYIKGHPVEADLDVVDLLASLYMGSKEFSKALECIEHA
DSVYCADNELPLNLTAKAGICHIHLGNFEKAECLFANLRREAGDEGSNLMIEVADSLLSL
KHYNLALKYYLMSEEVNAGGNVGILYLKIAQCYSSTNERAEAIVFFYKVLQHLEDNINAR
LTLASLLLEEAREEEAISLLSPPKDSNSTSSSSSKCKPWWLNERVKLKLCHIFRTKGMLE
NFVDAIFPLVRESLYIETLHEKIKVNKKKLPKRVLLERVKVLDGRKTGGLFRGFRPVAPK
SDLSKASRAKKLLQKRERIKEEKKAQALAAGVNLNYDDFDDEPMLRVPRESPLPNLLKDE
EYHNLIVDLCKALASLGRCSEALEIISLTLKLAFNSLSIERKEELQLLGAQLAFSSTDTK
HGFNFAKHVVKQYPYSNSAWNCYYKVSSRMTNRDSRHCKLLNSMQTKYKDCAPPYIIAGH
QFTAISHHQDAARKYLEAYKLLPDSPLINLCVGTALINLTLGFRLQNKHQCVAQGLAFLY
KNLKLCDNSQEALYNIARAYHHIGLVTLAVTYYEKVLATYQKDCPIPELFGENQDGKHQT
SVYCDLRREAAYNLHLIYKESGALDLARQVLKDNCTF
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggggaatacaatttctgacaatgaagaggttcctggttgtgatgtgcga
ggaaaaagagttgtagaaacagaagtagaggatagagaggaggaggaggaggaggaggaa
gaggaagaagacgaggaagaagtagaggatgaaggagaagatgataatgaagaagaagat
ggttacattttcaaattcaaggccggagaaaatccttttgattttgttgaagggacagat
tttagcatccaaccatataaaaaatttgagcgtcttgaatatgaagctcttgctgagaaa
aagcgaaaggctcttgcaaatggtcagagcgagaggtctgcaaagagaggcagggtagaa
gatatttctggtgcaagctttgaggaaattatggaagctatgaattatggatctaggagg
aagcgaaggcagcctaaaaaacgaggtaggcggaaaggatcaaagagaaagcttaattgt
gatgttacaaagttgctcggtgatgcaaccttatgttatgctcaaggccagtatgagaag
gctatatctgtattgagtcaagttgttctgcaagccccagatgtacccgattcgtaccat
acacttggacttgtttataatgcaattggggatgatgtaaaagccatgggattctacatg
ctagctgcacatttaatgccaaaagattcatctctctggaaactgctattttcatggtca
attgaccgaggtgacattgatcaagccagctactgtctttctaaagcaataaaagcagag
cctgatgatattaatttattattttaccgtgcatcactctaccttgagcgtggagattgt
cagaaagcagctgaaacatatgaccaaattcaccaactaagtgttgaaaatgttgaagca
ctaatgacaggagcgaagctgtaccaacaatgcggtcatcttgaacgtgcaatttgcatt
cttgagaactacatcaaaggacatccagttgaagctgatttagatgtagttgatcttcta
gcttctttatacatgggaagtaaagaattcagcaaagctcttgagtgcattgagcatgca
gatagtgtgtactgtgcagataatgagctacctttaaacttgactgctaaagcaggaata
tgccacatccatcttggaaattttgagaaggcagagtgcctctttgctaatttgagacga
gaagctggcgatgaaggctcaaatttgatgattgaagttgcagactcattactgagtctt
aagcactataacttggcattgaagtattatctgatgtcagaagaagtaaatgctggaggg
aacgtgggaattctatacctaaaaattgcccaatgttactcatcaactaatgaaagagca
gaggcaattgttttcttttataaagtgcttcaacatcttgaagataacattaatgctcga
ttaactttggcttccctcctcctcgaggaagctagagaagaagaagccatttcattacta
tctcctccgaaagattcaaactcaactagctcatcttccagcaaatgcaaaccttggtgg
ctcaatgagagagtaaaactgaagctttgccacatattcagaactaaaggaatgcttgag
aacttcgttgacgcaatctttcctttggtccgtgagtccttgtatattgagactcttcat
gaaaagattaaagtgaacaagaagaagcttccaaagagggttttgcttgaaagagtcaaa
gtactagatggacgtaaaaccggtggcctatttcgtggattcagacctgtagctcctaaa
tcagatttatcaaaggcgtcgagagcaaagaaattgcttcaaaagagggaaagaatcaag
gaagagaagaaggctcaagctctggctgctggagtcaatctgaactatgatgatttcgat
gatgagccaatgctacgggtgccccgagaatctcccctgcctaatcttctgaaggatgaa
gaatatcataatcttattgttgatttgtgcaaggctttggcttccttgggaagatgttct
gaagctttagagatcataagtctaactttaaagttggcttttaactcgttgtccatagaa
aggaaggaggaactccagttactcggagctcaactagcattcagctcaactgataccaag
catggattcaactttgcaaagcacgttgtgaagcagtacccttatagcaattctgcttgg
aattgttattataaagtatcttcaagaatgacaaaccgggattcaaggcattgcaaactt
ctgaatagcatgcaaaccaagtacaaagattgtgcaccaccctatatcattgcagggcat
caatttaccgccattagccatcatcaagatgcggcaaggaaatatcttgaagcttataaa
ctgttgccggatagtcccctaattaacttgtgtgttggaacggccttgatcaacttgaca
cttggatttcgtcttcaaaataagcatcagtgtgttgcacaaggcttggcattcctctac
aaaaatttgaagctttgtgataacagccaggaagccttgtacaacatagctcgagcatat
catcacattggactcgtgacactggcagtcacgtattacgaaaaggtgcttgcaacttac
cagaaggattgtcccatcccagaactttttggagagaatcaagacggtaagcatcagaca
tcagtctactgtgatctacgtagagaagcggcttacaatctgcatctcatatataaagag
agcggagctttagatcttgctaggcaagtcctaaaagataattgcacattttaa
DBGET
integrated database retrieval system
