Cucurbita pepo subsp. pepo (vegetable marrow): 111788907
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Entry
111788907 CDS
T05351
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00730
Thiamine metabolism
cpep01100
Metabolic pathways
cpep01240
Biosynthesis of cofactors
Module
cpep_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
111788907
Enzymes [BR:
cpep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
111788907
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
111788907
NCBI-ProteinID:
XP_023525246
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Position
LG02:10664369..10669263
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AA seq
675 aa
AA seq
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MLFVFSARASSRSLIFERSKMSSIQATITPAVGKSGNRSYSTKLLKSAFFPGFDVVGRVS
GACKELHPSSITLAPRATLTFDPPETSTEKAKNKKHTVDPSSPDFLPLPSFELCFPKSTK
EHKEIVHEETGHVLKVPFRRVHLSGDEPHFDNYDTSGPQNISPRVGLPKLRKDWVDRREK
LGAPRCTQMYYAKQGIITEEMLFCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIV
GRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSP
VPLGTVPIYQALEKVNGIAENLTWDIFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRM
TGIVSRGGSIHAKWCLAHHKENFAYEHWDDILDICNQYDISLSIGDGLRPGSIYDANDTA
QFAELLTQGELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTD
VAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAK
GHPHAQSWDDALSKARFEFRWMDQFALSMDPMTAMSFHDETLPSEGAKVAHFCSMCGPKF
CSMKITEDVRKYAEEHGYGNVEEALQQGMDAMSAEFLSAKKTISGEQHGETGGEIYLPAS
YVDSMKRTAREGERV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgtattttcagctcgtgcctcatctcggagtctgatttttgaacgatcaaag
atgtcgtctattcaagctaccataacacctgctgttggaaagagtgggaaccgttcctac
tctacgaaattgcttaagtctgccttctttcctgggtttgatgtggttggtcgtgtttcc
ggtgcatgcaaggaattacacccttcatctattaccttagcacctagagccactttaacc
tttgaccccccagaaaccagcacggagaaggccaaaaacaagaaacatacagttgatcct
tcttctcctgattttttgccgcttccttcatttgagctgtgttttccaaaaagcacaaaa
gaacacaaggaaattgttcacgaagaaactgggcacgtgctcaaagtaccctttcgacgg
gttcatttatctggtgatgaaccacactttgacaattatgacactagtggtcctcaaaac
attagcccccgtgttggattgcctaaacttcggaaggactgggttgataggagagaaaaa
ttaggagcaccaagatgcacacagatgtattatgccaagcaaggaatcataactgaagaa
atgttgttttgtgccactcgtgagaagcttgacccagagtttgtgaggtcagaggttgct
cgtgggcgggcaatcatcccttccaacaagaagcatttggaattggagcccatgattgtg
ggtagaaatttcttggtcaaagtaaatgcaaatattggaaactctgctgttgcgagttca
attgaagaagaagtttataaagtccaatgggcgaccatgtggggagctgatactgtcatg
gacctctctactggtcgtcacatacatgagactcgtgagtggattttgcgtaactcacca
gtaccattaggaactgtacccatatatcaggcacttgagaaagtgaatggaatagctgaa
aatctcacctgggatattttcagagaaacactgattgaacaagctgagcagggtgtagac
tatttcactattcatgctggggtcttactgcgatacatccctctaacagccaaaagaatg
acgggaatcgtatcacgtggaggatctattcatgcaaagtggtgtttggctcatcataag
gaaaactttgcttatgaacactgggatgacatacttgacatctgtaatcagtatgatata
tccctatcgattggtgatgggctgagacctggttcaatttatgatgctaatgacactgct
caatttgcggagctcttaactcagggtgaactgactcgtagagcatgggaaaaagatgtg
caggtaatgaatgaaggaccaggacatgttccaatgcataagatccctgaaaatatgcaa
aaacagcttgagtggtgtaatgaagcacctttttacactctcggccccttgactacggat
gttgctcctggatatgaccacattacctctgccattggtgcagccaatattggggccctt
ggcacggctcttctctgttacgtgacaccgaaagagcacttaggattgccgaatcgagat
gacgtgaagactggagtaatatcatataagatagctgctcatgcagctgatctagccaaa
ggtcacccacatgcacaatcatgggatgatgcactgagtaaggcaagattcgaatttcgg
tggatggatcaatttgctttgtcaatggaccctatgactgccatgtcctttcatgatgaa
accttgccatcagaaggtgccaaggtagcccatttctgctccatgtgtggacccaagttc
tgctccatgaagataactgaagatgtgcggaagtatgccgaggaacacgggtacgggaac
gtagaagaagctctgcagcaagggatggatgctatgagtgctgaatttttgtctgcaaag
aaaaccattagtggtgaacaacatggtgaaactggtggggaaatctacttgcctgcaagc
tacgtggactccatgaaaaggaccgctagggaaggagaaagggtttga
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