KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111788961
Entry
111788961         CDS       T05351                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111788961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111788961
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111788961
 Complex B
    111788961
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 HATPase_c
Other DBs
NCBI-GeneID: 111788961
NCBI-ProteinID: XP_023525325
LinkDB
Position
LG02:76608..78788
AA seq 276 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNICDNLADHMIGNVYVQFREED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL
RRKLFGSRFRGYRRSRSRSRSLSPRNRKDYDRRERDYRDRDHRGNGRSKERPDRFDRDGG
RRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
NT seq 831 nt   +upstreamnt  +downstreamnt
atggctgaacacttggcctcaatatttggcaccgagaaggaccgtgtcaactgccctttc
tatttcaagatcggcgcctgccgtcatggagatcgttgctctcgcctccacaaccgccct
actatttcccccactcttctcttatcgaacatgtaccagcgccccgacatgatcacccct
ggtgtcgatgctcagggtcagcccatagatccccgcaagattcaggaacacttcgaggat
ttctacgaagacatttacgaggaactcggaaagttcggtgagatcgagagcctcaacatc
tgtgataatctcgccgaccacatgatcggcaatgtttacgttcagtttagggaggaggac
caggctgctgccgcacttcaagcgttgcaagggcgattctactctggtcgacccataatc
gcagatttttctccggtgacagatttccgcgaggccacgtgccgccagtacgaggagaat
aattgtaatcgaggtggatattgcaattttatgcatgttaagatgattgggaaggacttg
aggaggaagctgttcggtagtaggttccggggttataggcggagccgtagcaggagtaga
agtttgagtccgcggaaccggaaggactacgataggcgtgagagggattatagagatcgt
gaccatcgtggaaacggacggagcaaggagcgtccagataggtttgacagagatggggga
aggagaaggcatggaagccccaggcgaagcagaagtcctgtcagagaaggaagcgaagag
cgccgagcccgtattgaacagtggaacagagagagggaggagaagcagtga

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