Cucurbita pepo subsp. pepo (vegetable marrow): 111789039
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Entry
111789039 CDS
T05351
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111789039
Enzymes [BR:
cpep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
111789039
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111789039
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
111789039
NCBI-ProteinID:
XP_023525424
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All DBs
Position
LG02:complement(5313516..5318604)
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AA seq
615 aa
AA seq
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MPAAKFNKKKAVKRDDPQSKRKKKDELFTPKRGKKEEENDSDLSDALDVEEVEDGMLDAD
EQGSGSGSGSEVSSDGDDPLADDFFHGSDEENVSRSVSGSDSDESDIEEKSRAIDEERAR
EEKDAADEMQLNIKEESDEFRLPTKEELEEEALRPPDISNLQRRIREIVRVLSNFKALRQ
EGATRKDYVEQLKKDIGSYYGYNEFLTGVLVELFPVVELMELIEAFEKPRPICLRTNTLK
TRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQGASSFLPVM
ALAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIFANEMKVPRLKSLTANLHRMGVTNTV
VCNYDGKELPKVLGMNTADRVLLDAPCSGSGVVSKDESVKTSKSLEEIQKCAQLQKQLIL
AAIDMVDANSKSGGYIVYSTCSIMVDENEAVVDYALKKRNVKLVPCGLDFGRPGFIRFRE
KRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNKIPTAQSSEALEEEAVEEEDFEAEKKS
ANEKNDGECLHPQVNDGKKRKKVVSEKHEVENGEESKPGVEKRKKRKFPSREEISKAREE
KREALREKKAGGSKK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgccaagttcaacaagaagaaagctgtgaaacgagacgacccacaatcgaaa
aggaagaagaaggacgagctcttcacgcctaaacgtggaaagaaagaggaggagaatgat
tctgacctctctgatgctctggatgtggaagaagtagaggatggaatgcttgatgctgat
gaacaaggatctgggtctggttctggttctgaagtttcttctgatggtgatgatcccttg
gctgatgatttcttccatggaagcgacgaagagaatgtttctcgttctgtttctggttcg
gattctgatgaatctgacatcgaagagaagtcgagagctattgatgaagaaagagcgagg
gaagaaaaagatgcagctgatgaaatgcagctcaatattaaagaagaatccgatgagttc
agattaccaaccaaggaggaacttgaagaagaggcgcttagacctcctgacatttcaaat
ttacaaaggcggataagagaaattgttcgagttctttcaaatttcaaggctttgaggcaa
gagggggcgacccggaaggattatgttgaacaacttaagaaagatattggttcatactat
ggttataacgaatttcttactggggttctagttgagttgtttcctgttgtcgagctaatg
gaacttatcgaagcttttgaaaagccgagaccaatatgtttgcggactaacaccttaaag
acaagaaggcgtgatctggcagatgttctgattaacagaggtgtaaacctagatccttta
agcaagtggtcaaaggttggacttgttgtatatgattcccaagtgccaattggagcaact
cctgaatatatggctggtttttacatgctacaaggtgcaagctcctttcttcctgttatg
gcccttgctcctcaagaaaaagaacgaatcgttgacatggcggcagcacctggtggtaaa
actacttacatagcagcactcatgaaaaatagtggaataatatttgctaatgagatgaaa
gtaccaagattgaagtcacttactgcgaatttacatcgaatgggagtgacaaatactgtt
gtctgtaactacgatgggaaggagctcccgaaagtgttggggatgaatacggccgataga
gttctattagatgccccttgtagtggatctggagttgtatctaaggatgaatctgttaaa
acctcaaaaagccttgaagaaatccagaaatgtgctcagttgcagaagcaacttatactt
gctgcaattgacatggttgatgcaaattcaaaatccgggggctatattgtttactccacc
tgttccataatggtcgacgagaatgaagcagttgttgactatgcactaaagaagaggaat
gtcaaacttgttccatgtggccttgatttcggacgtcccgggtttatccggtttagggaa
aaacgttttcacccatctttagagaagacaagacgtttctacccccatgtccataacatg
gatggcttttttgtagcaaagttgaagaaaatgagcaacaagataccaactgctcaatct
tcagaagcattggaagaagaggcagtggaagaggaggattttgaggcagagaagaagagc
gcaaatgagaagaacgatggcgaatgccttcacccacaagtgaacgatggtaaaaagagg
aagaaggtcgtttcggaaaaacacgaagttgaaaatggcgaagaatcaaagccgggtgtg
gaaaagaggaagaagagaaaatttccctcgagagaggaaatctcaaaagctagggaagaa
aagcgagaagctttgagggaaaagaaagctggtgggagcaagaaataa
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