Cucurbita pepo subsp. pepo (vegetable marrow): 111789154
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Entry
111789154 CDS
T05351
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111789154
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111789154
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_1
PPR_long
Motif
Other DBs
NCBI-GeneID:
111789154
NCBI-ProteinID:
XP_023525582
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Position
LG02:complement(10159413..10163419)
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AA seq
788 aa
AA seq
DB search
MSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSAKGRRQLTRIPAFASS
SSVEALVHDRDSPAESEEPLCSPYSTGAEGFASADLKHLGAPALEVKELDELPEQWRRSK
LAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRIRENETAFRVYKWMMQQHW
YRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIE
EASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVTTGLELHK
DIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVMEAERSW
LKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSVSAAAYQTIIGILCKVE
EVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSI
YLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIYDLMCQK
KYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEGRKNHRI
QFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPYKFCTVSHSYFGFYADQFWP
RGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSLGEKSMSC
KVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADSLNMEKAVNETYNINFDSQS
DSDEEASS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcgaacctctgccttcgccaccgtcacccttctccgctctctcactctttcc
ttccctctatgccaccaccacttccgttgccggaactacgtcatccgttctctctctatc
ccaacatattcagcgaaaggacgacgacaacttacgaggattcctgcctttgcttccagt
tcttccgttgaagcgttggtgcatgaccgggattccccggccgaatctgaagagcctttg
tgttctccatacagtactggcgctgaggggtttgcgtcggcggatttgaaacacttggga
gcgcctgcgcttgaagtcaaggagctggatgagttgccggagcaatggcgtagatccaaa
ttggcttggctttgtaaagaattgccggcacataagccgggaacattgatacgactgctt
aatgctcagaggaaatggatgaagcaggatgatgcggcctatgtcatcgtgcattgtttg
cgtattcgcgaaaatgagactgcttttagggtgtacaagtggatgatgcaacaacattgg
taccgatttgattatgctttagctactaagcttgctgattacatgggcaaggaacggaag
ttctcaaagtgtcgggaagtatttgatgatataattaatcagggatgtgtgccaagtgaa
tccacatttcatatattgattgttgcctaccttagtgcacctatccaaggatgcatagag
gaagcaagtgccatttacaatcgtatgattcagttaggaggttacgaaccacgtcttagc
ttgcacaattctctctttaaagctctcttgagcaaaccaggggatttgtcaaagcatcat
cttaaacaggctgagttcatatatcacaatctggtaacaactggacttgagttgcataaa
gatatatatgctggtctaatttggctacatagttatcaggatactgtagacaaagaaagg
ataatgtcactaaggaaagaaatgcaacaagcaggaattgaggaagaaagagaagtcctt
gtatccatcttgagagcgagctcgaaattgggggatgtgatggaagcagaaagatcgtgg
cttaaacttaagtcttttgatggtagcatgccatctcaggcttttgtttacaaaatggaa
gtatatgcaaaggtgggtaatccgatgaaagctttcgagatatttagggagatggagcag
ttgaactctgtaagtgctgcagcatatcagacaattattgggattttatgtaaagttgaa
gaggtaacacttgcagaatccgtcatggaaggcttcataaagagtaatttaaagcccctc
aagccagcttatgttgatttgatgaatatgtttttcaatttaagcttacatgataagtta
gagttaaccttctcccagtgccttgagaagtgtaaaccaaatcgtactatttacagcata
tatttgaactctttggtaaaagttggtaatctcgacagggctgaagaaatatttagccag
atgcaaacaaatggagaaattggtgtaagtgctcgttcatgcaacattattttaagtggg
tacctgttaagtggggattatttgaaggctgaaaaaatatatgatttgatgtgtcagaaa
aagtacgacattgatcctccattaatggagaaacttgattatgtcctaagcttgagtagg
aaggagattaagaagccagtaagcttgaagttgagtaaagaacaaagggagattttagta
gggttgttattaggtggcctggagatcgaatctgatgaagggaggaagaatcataggatc
caatttgaattccacgaagatcgtagcacccactctcgtttgaggagacacatatatgag
caatatcatgagtggttacatcctgcttcaaagtcaagcgatagtgatacagatatacca
tataaattctgcaccgtttcgcattcatattttggtttctatgccgatcagttttggcca
cgaggccatcctgcaatccctaatctaattcaccggtggctttcacctcgtgttcttgct
tactggtacatgtatggaggctgcaggatatcgtcaggggatttcgtactgaagctaaag
ggaagtcgtgagggtgttgcgaagattgttaaatctctgggagaaaagtccatgtcttgc
aaggtgaaaaggaagggcagggtgtattggataggcttacttggaagcaacgccacatgg
ttctggaaactaattgaacctttcattctggatgacttgaaagataggttacaggcagac
agccttaacatggagaaggctgtaaatgaaacttacaatatcaactttgatagtcaatct
gattccgatgaggaggcgtctagttag
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