Cucurbita pepo subsp. pepo (vegetable marrow): 111789179
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Entry
111789179 CDS
T05351
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111789179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111789179
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
111789179
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111789179
Prokaryotic type
111789179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
111789179
NCBI-ProteinID:
XP_023525611
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Position
LG02:6309190..6316228
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AA seq
318 aa
AA seq
DB search
MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQ
KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLC
KFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF
TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
RTNMLLKELGIGAIDWQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttctcgccttcacttaaatccaaaaccagaaccctaatcgacatcttccag
ccagcgctttccaaacgcttaaaaacctcacagacgctgaaaacccttgcaaccacggac
gacaaatgcgattcagagctcacattggcttcctcttcgatggacatctcttcctctcag
aaatcccgcatggaaaccaacaaatggttggccagatcgaagcgcaatctcaaaatttcc
tcagatagggtttccaaatgggagaatggatgtgtgaagttggaggagcttttggtggac
gagacatggttcgaagcccttcccggagagtttgagaagccctatgctcttaacctctgc
aagttcgtagagacggagatttgcagcagcggtgtccctgtttatcctcctccctctttg
atctttaatgctctgaattctacccctttcgatagggtgaaagttgttattctcggtcaa
gatccttatcatgggcctggtcaagctatgggtctttctttttctgttcctgaaggagtt
aaaatcccatcaagtcttctcaacatattcaaggaactgagggaagatcttggttgttcc
attccatcccacggaaatctcgagaaatgggctgttcagggagtcttgttgcttaatgct
gttctcacagttcgaaagcatcaagccaactctcatgctaaaaaaggatgggaacaattc
accgatgctgtcatccaaacaatatcacaaaagaaggaaggagttgtctttctcctttgg
gggaactctgctcaagcgaaattgaggttaattgatgagaaaaaacatcacattctcaaa
gccgcgcatccttctggtttgtcggccaacagaggcttctttggttgcaggcatttttct
cgaacaaacatgcttctcaaggaactgggtattggcgccatagattggcaactctga
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