KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111789235
Entry
111789235         CDS       T05351                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B'' 2-like isoform X1
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111789235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111789235
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111789235
 Complex B
    111789235
 Complex C
   U2 SnRNP specific factors
    111789235
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_SRRT RRM_PARP14_3 DUF6445 RRM_ACIN1 xRRM DUF4523 Med19 RRM_YTH1 TP_0593_N
Other DBs
NCBI-GeneID: 111789235
NCBI-ProteinID: XP_023525708
LinkDB
Position
LG02
AA seq 231 aa
MLLGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFS
EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPREKKKKQEEKAERKRRT
DETHQSAMPNGATAENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQY
PGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgttattgggggatataccacctaaccagaccatatacattaagaatctcaatgagaag
gtcaagaaagaagaattgaagagatccctctatgctttgttttctcaatatggaaggatc
cttgacgttgttgccttgaagaccccgaggcttcgagggcaagcatgggttgcatttagt
gaagtgactgcagctagcaatgctgtgcggcagatgcaaaacttcccattctatgataag
cctatgcgaattcaatatgccaaaaccaaatcagattgtgttgctaaagctgatggaagc
tttgtgccaagggagaagaagaagaagcaagaggaaaaagctgagagaaagcgacgtact
gacgaaacacaccagtctgcgatgcccaatggagcaaccgctgagaatggaggttcaaat
gccacattccgtcatgcaaatccaagcgctccagaagctactccaaacaacatactattt
attgagaatttgcctcatgaaacttcgagtatgatgttgcaagtcctcttccaacaatat
cctggattcagggaagtccgaatgattgaagcaaagccgggtattgcttttgttgagttt
gaagatgatgttcaatcctctatggcgatgcaggctcttcagggctttaaaattgatccc
caacatcccatggccatctcttttgcaaagaagtaa

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