Cucurbita pepo subsp. pepo (vegetable marrow): 111789411
Help
Entry
111789411 CDS
T05351
Name
(RefSeq) RNA polymerase II degradation factor 1-like
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
CDC45
Motif
Other DBs
NCBI-GeneID:
111789411
NCBI-ProteinID:
XP_023525947
LinkDB
All DBs
Position
LG01:7987087..7989937
Genome browser
AA seq
771 aa
AA seq
DB search
MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL
ISVTTDEDLENMIDEYDRTACNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED
WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREVDGSQPGSLGNGKSGKQ
DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE
EQFSQMIIGQKQQDEAFTALSSPPPLPTTIVASATGSAIPVSSAAGVCIGDYTNRVISDD
ERSDHGAPVGYRQPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY
QEQVVHQIPSSTAWLPCNPADPEVNISDQNARVHIQQQVQESGYVLQSHYDQHQHQQLQQ
LQQLQQQQQIQQQHQQHQQHQQQQLQQQLQQHQQQQHQQQQLQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQHPSQPQQFIHAGAHYIHQHPSGAVPIPAFFPVYSPQPHHHPHQMEQQ
YPVYYLPTRQGQAYGNLPVQQSSISESATAIPPGRPQTPPNPTLVTTAAYNHVRNAPSAK
TEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVAYNQGYSHIQHPSQSVAPTSATANYAYEF
SDPAHSQIYFTQPLAPSQYQAMPAAAVMLPENSAQHPTDNIKQQMRTSQPL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaccgccgcctctgacgaccgctcagccgcttccgacggcggcgtcgcctcag
ctcaattatccggagtcgttggactcatctccgaggtctcgcaacacggacacgtgggat
gagccgctcgcccccggccctctagcaggccgtcttcgtcttatgtgcagctacggtggc
catatagtccctcgccctcatgataagactctgtgctatgtctgtggtgagactcggatc
gttgttgtcgaccgccatacgtctttatctgacctcactgcgcgtttgtcgaagacgctt
ctcaatggtaggtcgtttaccctgaaatatcagcttccgaacgaggacttggattctctc
atttctgttaccaccgatgaggatttggagaatatgattgatgaatatgatcggacggcc
tgcaattcgtctaaccctgcggcaaaaccctcgcgacttaggttgtttctgttcccgacg
aagccggatgtttctcagtcgatcgggccaattctcgagagctcgactagttcggaggac
tggtttctgaatgctttgaatggtgccggttttctcaatagaggtttttccgattctgca
tcggtcaattgcttgttagggcttgatgatgatgttggtgttaataacctcgattcgggt
ccgagggaggtggatggttctcagcctgggtcgttgggaaatggtaagagtggaaaacag
gatattcattctgtccctgattcacccatgatcgagacgacatcgtcatttgggtctacc
tcttcttcgccttctctggcgaatttgccgccgatccgggttcatgtggaggatagcgtc
aatagcggtggcggtggtgctggtgcagttcgaattcaagatcagaaggtgggaattgag
gagcaattttcgcagatgattattggtcagaaacagcaagatgaagcgttcacggcactc
tcatcgccgcctcctttaccgacaactattgtggcttctgcgacgggctctgcaatacct
gtgagctcagctgccggagtatgtataggagattatacgaaccgggtgatctccgatgat
gaaagatcggaccacggggcgccagtcggataccggcaaccactaccacctcagccacag
tctctggccccccaattgcagcagaaatcaagtggacttgttgatattccttctccggac
tcggtgtcaagtgatactagtttaaacaatcagatgtctcgctcaaaacctgtgatgtat
caagaacaagttgttcatcaaatcccctcttcaaccgcttggcttccttgcaatcccgca
gatcctgaagtcaatatttctgatcaaaacgctcgggttcatattcaacaacaggtccaa
gaatcaggatatgtgttacaatctcattacgatcagcatcaacatcagcaacttcagcaa
cttcagcaacttcagcaacaacagcagattcagcaacaacatcaacaacatcaacaacat
caacaacagcaacttcagcaacaacttcagcaacatcaacaacagcaacatcaacaacag
caacttcagcagcagcaacagcagcagcagcagcagcagcagcagcagcagcagcaacag
cagcagcagcagcaacagcaacaacagcaacaacagcaacacccatctcaaccacagcaa
ttcatacatgcaggcgcacactacatccaccagcacccatctggtgcagttcctattcca
gcattcttccctgtatattctcctcagccccatcatcatccccatcagatggagcagcag
tatccagtctactacctgcctactaggcagggccaagcttatggcaatttgccagtacag
caatcttccatcagcgagtctgctactgctattcctcctggccggccccaaaccccaccc
aatccgactttggttacaactgcagcttacaaccacgtaaggaatgcccctagtgcaaaa
actgaaatggctgccaaggcatacaaacagacaactacagctgctcagtcgttagttcag
gttcctacaaatcagcatcagcaacaatatgttgcctacaaccagggttactctcatatt
cagcatccatcccaatcggttgcacctacatccgctactgcaaattatgcctatgaattt
tcggaccctgctcattctcagatatactttactcaacctctagcaccttctcagtaccaa
gccatgccagcagctgctgtaatgctgcctgaaaattctgctcagcatcccactgacaac
atcaagcagcagatgagaacttcacaaccattatag
DBGET
integrated database retrieval system
