Cucurbita pepo subsp. pepo (vegetable marrow): 111789656
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Entry
111789656 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111789656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111789656
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111789656
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
GalA_N
Motif
Other DBs
NCBI-GeneID:
111789656
NCBI-ProteinID:
XP_023526061
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Position
LG03:3260965..3266067
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AA seq
782 aa
AA seq
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MFLAITRPIGLSTISLAPTQLHPHFLLNFSFLSSSSDLHQPSISVCRFLSLSNTHISRRG
TQKNPXNPPWKMNRIIQSPASKFRPFRRYLDGSSTDKTTGVATATDEHPNYILLRYQILD
PDSDIVAQWNRLFLVTCLIALFIDPMYFYTSSVGGPACLTSEVNLGIVITFFRTVMDLFF
LLHMVLKFRTAYVAPSSRVFGRGELVMDARAIAKRYLKSDFVIDLAATLPLPQIVMWLVI
PATRHSRVDHANNTIALLVLLQYVPRLFLIFPLNQRIIKTTGVVAKTAWAGAAYNLILYM
LASHVLGSTWYLLSIGRQFACWKSECAKENASKVLTCLPIFLDCNSLNDTDRQYWLNVTH
VTSKCDPRNENIRFKFGMFSDAFTSDVASSHFIAKYFYCLWWGLRNLSSYGQTLDTTTYL
GETLFCISTCIVGLILFSQLIGNMQTYLQSMTVRLEEWRIKRRDTEEWMRRRQLPPDLQE
RVRRFVQYKWQATRGVNEESILRSLPIDLRREIQQHLCLSLVRRVPFFSQMDDQLLDAIC
ERLVSSLCTQGTYIVREDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLKPGDFCGEEL
LTWALMPSSSLNMPSSTRTVRARTEVEAFALRAEDLKFVAGQFKRLHSKKLQHAFRYYSH
QWRTWGACLIQVAWRRLKKRKLAKKSVFRNSLSYGDSIQEDIEYDVELAEEHYDHDDDDS
DEDMSTADYMNKTQHLGATLLASKFAANTRKGVHLKAQKSKASSLKMPKLFKPDEPDFSM
DG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttcttggctattacacgtccaattggcctctccacgatttcgcttgcaccaacccaa
ttacatccccatttcctcctaaatttctcatttctttcttcttcttccgatctccatcaa
ccctcaatctctgtctgtcgctttctctctctctctaacacacacatttctcgccgggga
actcaaaaaaaccccnggaatccgccatggaagatgaatagaatcatacagtcgccggcg
tccaagttccgcccctttcggcgataccttgacggctcgtccaccgataagactaccggc
gtggcgaccgccacggacgaacaccctaattacatcctcctccgttaccaaatcctcgac
cctgacagcgacattgtcgcgcaatggaatcgcttgtttctagtgacatgcctgattgcg
ctattcatcgatccgatgtatttctacacgtcgtctgtcgggggacctgcctgcctgaca
tcggaggtgaatctgggaatagtgatcacgttcttcagaacggtgatggatctgttcttc
ttgctgcacatggtgctcaagtttcgaaccgcgtatgtcgctccgagctctagggttttt
ggaaggggagagctggttatggatgccagagccattgcaaagcgctatttgaaatctgat
tttgtgattgatctcgccgccactctccccctcccacaaatagtgatgtggttggtgatt
ccagcaacaagacattcaagggtggatcatgccaacaacacaatcgctctccttgttctt
ctccaatacgttccaaggctgttcctcatcttccctctcaaccaacgcatcatcaaaacc
actggcgttgttgccaaaactgcctgggctggtgctgcctacaatctcatcctctacatg
cttgccagtcatgtgttgggatctacatggtatttgttgtccatagggagacagttcgca
tgctggaaatcggagtgtgcaaaggaaaatgcgtccaaagttctaacatgtcttcccatc
ttcttggattgcaacagtttgaatgacactgacagacaatattggctgaatgtcactcat
gttacttccaaatgcgatccaaggaatgaaaacattaggttcaaatttggaatgttctct
gatgctttcaccagtgatgttgcctcctcccatttcattgctaagtacttttattgtctt
tggtggggcctcagaaatttaagttcttacggacaaactttggacacaacaacttacctt
ggcgagacattattttgcatatcaacgtgcatagttgggttgatactattttcacaactc
attggcaatatgcagacatatttgcagtcaatgacagtaagactcgaagaatggaggata
aagagaagggacactgaagaatggatgcgacgtcgtcaattaccaccagatttgcaagaa
cgagttcgacgattcgttcaatataaatggcaggccacgagaggagttaatgaagaatcc
atattgcgttcattgcccattgaccttcgccgtgagattcaacaacatttgtgtttgtcg
ctcgttcgtcgtgttcctttcttctcacaaatggacgatcaacttctcgatgccatatgc
gagcgcctcgtctcgtccttgtgtactcaaggaacgtatatcgtgcgagaggatgaccca
gttaacgaaatgttgtttattataagaggacaactagagagctccacaacaaatggcggt
cgttctggctttttcaactcaatcacattaaaaccaggtgatttttgtggtgaagaacta
ttgacatgggctttgatgccaagttccagtttgaatatgccttcttctactcgaaccgtc
cgagcacgtacagaagttgaagccttcgcccttcgagctgaagatctcaagttcgtcgcc
ggacaattcaaacgcctgcatagcaagaaactacaacatgcctttagatactattcccat
caatggaggacctggggtgcttgcttaattcaagtagcttggaggaggcttaagaagaga
aaattggcaaagaaatcagtattcagaaacagcttaagctatggagattcaatacaagaa
gatatcgaatacgacgtcgagctagcagaagaacactacgaccacgacgacgacgacagt
gatgaggacatgtctactgcagactacatgaacaaaactcagcatctaggtgctacactt
ttggcttcaaagtttgctgccaatactagaaaaggagttcatctaaaagcccaaaaatcc
aaagcttctagtttgaaaatgccaaagttgtttaaaccagatgaacctgatttttctatg
gatggatga
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