KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111789831
Entry
111789831         CDS       T05351                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111789831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111789831
   03041 Spliceosome [BR:cpep03041]
    111789831
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111789831
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111789831
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111789831
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 111789831
NCBI-ProteinID: XP_023526302
LinkDB
Position
LG03:2027772..2032031
AA seq 337 aa
MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK
AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG
DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
AQVPPAIPSMPYPVAAAGYPQPGKPHGGVTPVGYAYPPQALASYHASYPSPTSAHASYAS
QPQMPHPHQVIGKKDTPGLHLTTPAGMGGYPYYMAKQ
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggaggatttgaagaagaggaagctggaggagaccgttggcaacggtgaattttcgtca
gtcgaacatttgcggtctctccttgaaccgcttcccaagccacaactggtcgatctcctt
gccagactagggtcccagtatccttccattgcagaagaaataaaaagtgttgccagtgca
gatcctgtcaatcgaaagctttttgttcgtggcttggcctggaataccacttcagaaaca
ctgtgtgctacgtttagcgtccatggcgaaattgaagaaggagccgttatctatgacaaa
acgacaggcaagtctcgtggatatggtttcattacttacaagcatatggagtcaactaaa
gctgctttaaaagcacctagcaaaattattgagggtcgcatggctgtctgcaatctggct
tgtgagggtctaagtggatcaagtacaactccagatttagcacagaggaagctatacatt
ggtgggttatcaccagatattacaagtgaaatgttgctgaatttctttggaaggtatggt
gatatagaagaaggttcggttgcctatgataaagatacaaatgaatcacgagggttcgga
tttgttacatataccacagtcgaggctacaaagaaggcaatagatgatccagacaagacc
tttgggggaaggaacataattgtgaagctcgccgattcacacaggaacaagatgatgcag
gcacaagtacccccagctattccttctatgccatacccagtagcagcagctggatatcct
caacctggaaaaccacatggcggtgtcacccctgttggctatgcatatcccccccaagct
cttgcatcatatcatgcttcatatcctagtccaacgtcggcgcatgcttcgtatgcgagc
caaccccaaatgccacatccccatcaagtgataggaaagaaagacactcccggactccac
ctgaccacgcctgctggaatgggaggctatccatattatatggcgaaacaatag

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