Cucurbita pepo subsp. pepo (vegetable marrow): 111789840
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Entry
111789840 CDS
T05351
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B
KO
K08775
breast cancer 2 susceptibility protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111789840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111789840
03036 Chromosome and associated proteins [BR:
cpep03036
]
111789840
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111789840
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111789840
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
111789840
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
111789840
FA (Fanconi anemia) pathway
Downstream FA components
111789840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
111789840
NCBI-ProteinID:
XP_023526316
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All DBs
Position
LG03:184404..190753
Genome browser
AA seq
1102 aa
AA seq
DB search
MSSWQIFPKAGNNFQWELTGERLEVKSDCEQNVSLSRSNSSSVARLPSMADLLLCSRFMQ
SPEDADAGAPMFRTGLGKSVSVKQSSIEKALSMLADDNAPDIGQLHKGGNFSNSLFQTGS
GKSVNVSSQGLLRAKTLLGLEEDDTCSNFQRFGQAISPYDFEGEFLESKGACGMENTSNT
LVSNTFFSRSSLENHASPSFKQIELPNKAPKPPAVKFHTAGGRSLSISSDALQRARSLLG
DPELGSFLDEGDVDCYKEDMGNATPSNGKHAFHTPSFNMEDSTTTKHTSKSFVSPLRPSS
RAMQSSFKTKSILGSNLMKKFDAAEQESISRFDDNKSCLPETLGCQPSEPSTIVDNVSEN
GIRSGIHLGERSFGGPLNDISNIADSRSRSDRASNNEKRKLWSTNSVSPFKRPRNSKFST
PLNKNASLVTTSLSTSSSSNFGCKKRVSTRYPHQSSRMYIKEYFGRPPSTRDKLDYLPDE
VRRMNAENAEKYKVPDNSGTNCIGVEAFRHMLVESGASLQHSSELWVKNHYKWIVWKLAC
YERQCPVKSNGNFLTVSNVLEELKYRYEREVNQGHRSAIKRILEGDAPPSMLLVLCVSAI
RSNYKSRSQACSSSTNGSDYGEGAKVELTDGWYSVDALLDGQLSKQLLSGKLFVGQKLRI
WGARLCGWIGPVSPLEMSGAVYLTLHINGTFRAHWADRLGFCKNAGVSLSFKCIKSSGGP
VPSTLVGVSRKYPVLYKERLGDGASIVRTEKMEMKTRQLYDQRCTAIVDGIVSEFQRGTK
SRIYSECDSEEGAKLFKILETAAEPELLMAEMSPEQLTSFASYQTKIEAIRQSDMEKSIR
KALADAGLSGRDVTPFMRVRVVGLTSKSNQRETHRKEGLITIWNPTEKQQLELVEGQAYA
IGGLVPINCDADILYLQAKGSTTKWQSLSPQSMKCFKPFYNPRKSVSLSNLGEVPLSSEF
DVVAIVVHVGEVFTTAHQKKQWIFVADGSISESHSEGTSNSLLAISFCSPYADDESFVPI
NCNLTGSTVGFCNLIKRSKDQINNLWVAEATENSSYFLNFDSVDCSHMKNAAVSAKRWAE
NSTSIIENLREMILFMIGDRKG
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtggcagatttttcccaaagccggcaacaatttccagtgggaactaaccggc
gagcgtctcgaagtcaaatccgactgcgaacaaaatgtttccctttctcgaagtaacagc
agctccgttgcccgtctcccatccatggccgacctcttgctctgctctaggttcatgcaa
agtccagaggacgccgatgcaggcgctccgatgtttcgaaccggattgggaaaatcggtt
tctgttaaacagtcttcaatcgagaaggctttatctatgctcgccgatgacaacgctcca
gatataggtcaattgcataaaggaggtaatttctccaattctctctttcaaacgggctct
gggaaatcagtcaacgtttcttctcaaggtcttcttagagccaagacattgttaggactg
gaagaagatgatacttgttccaattttcaaagatttggacaagctatcagtccttacgat
tttgagggggaatttctggaatcaaaaggtgcgtgtggtatggagaacacgagcaataca
ttggtctctaatactttcttttcgagaagttcattagagaatcacgccagcccatcattc
aaacaaattgaattgcctaacaaggctcccaagcctcctgcagtgaagtttcatactgcc
ggggggagatccttatctatttcaagcgatgcactacaacgcgcaagaagccttcttggt
gacccagagttgggaagtttcttggatgaaggggacgtggattgctataaggaagatatg
ggaaatgcaacaccgtcaaatgggaaacatgcttttcacactccttccttcaacatggaa
gactcaacaactactaaacacacatctaaaagctttgtttcccccttacgaccatcttcc
agagctatgcaatcttcattcaagacaaaaagtatattagggagtaatttgatgaagaaa
tttgatgcagccgaacaagaaagtattagcaggtttgacgacaataaatcctgtttgcca
gaaactttaggctgccagcctagtgagccaagtacaatagtagacaatgtttctgaaaat
ggaattagatcagggatccatttaggcgagcgatcatttggcgggcctctaaatgacata
tcgaatattgctgactcaagaagtagaagcgatagagctagtaataacgaaaagaggaag
ctttggagtacaaattctgtatctccattcaaaaggccccgaaattccaagttctccacc
cccttgaataagaatgcatcacttgttaccacaagtttatctacttcatcatctagtaac
tttggttgcaaaaaaagggtttccactcggtatccacaccaatcctcaaggatgtatatc
aaagagtattttggaagacctccatcaacccgagacaagttggattacctgccagatgaa
gtcagaaggatgaatgcagaaaatgcagagaaatataaagttcctgacaactctggcaca
aattgtattggagtagaagcttttcgtcatatgttagtcgagtctggagcttctctgcaa
cattcttctgaattgtgggtcaaaaatcactacaagtggattgtttggaaactggcctgc
tacgaaaggcaatgtccagtcaaatcaaatggaaattttttgacagtttccaatgttctc
gaggaattgaaatataggtatgaaagagaagttaatcaaggccaccgttctgcaataaag
agaatactggaaggagatgcaccgccatctatgttgttagttttatgtgtttcagctatt
cgctcaaattacaaatcaaggtctcaagcttgttcatcctcgaccaatgggtctgattat
ggtgaaggggcaaaagttgaactcaccgatgggtggtattctgttgatgctcttttggac
gggcagctgtcaaagcaacttctttcgggaaaactgtttgtgggacagaaactcaggata
tggggagcgagattgtgtggttggatcgggcctgtttcacctcttgagatgtcaggggct
gtttatttgacgttgcatattaatggaacttttagagctcattgggccgatagactggga
ttctgcaaaaatgctggtgtttcattatcctttaagtgcatcaagagtagtggaggtcca
gttccttcgactttggttggagtctcacggaaataccctgttctttacaaggagaggtta
ggtgatggggcatccatagtaagaaccgagaagatggagatgaagaccaggcaattatat
gatcagaggtgcacagctattgtagatggtattgtttctgaattccagagagggacaaag
agtcgtatctacagtgagtgtgatagtgaagaaggggcaaaactctttaagatcctcgag
acagcggctgaacctgaacttttgatggcagagatgagtcctgaacagttaacttctttt
gcgagctaccaaacaaaaatagaggcaatcaggcaatcggacatggaaaaatcaatcagg
aaagcgttagcagatgctgggttaagtgggagagatgtcactccatttatgagggtgaga
gtggttggacttacaagcaaaagcaaccaaagagaaacccataggaaggagggcttgatt
acaatctggaatccaacagagaagcagcaacttgagctggttgagggccaggcatacgct
attggaggacttgtgccaataaattgcgatgcggatattctttacttgcaagcaaaagga
tcaactaccaaatggcagtctttatctccacagtcaatgaaatgcttcaagcccttttat
aacccccgaaaatcagtttcgttatcaaatttgggggaagtccctctatccagtgaattt
gatgtcgttgcaattgttgtacacgtgggggaggtttttacaactgctcatcagaagaaa
cagtggatatttgtggcagatggttcgatatccgagtcacattcagaaggcacttccaat
tcactgcttgctattagtttctgttcaccgtatgcggatgatgagtcatttgtgccaatc
aactgcaaccttaccggctcaactgtaggtttctgcaatcttattaagagatcaaaggac
cagatcaataatctctgggtggcagaagcaacagaaaattcgtcctactttttgaatttc
gattctgtcgattgttctcacatgaaaaacgctgcagtttctgctaaaagatgggcagag
aattccacttcaattatcgagaatctcagggagatgattttatttatgattggtgatcgt
aaaggctag
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