Cucurbita pepo subsp. pepo (vegetable marrow): 111790023
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Entry
111790023 CDS
T05351
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111790023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111790023
Membrane trafficking [BR:
cpep04131
]
Endosome - Golgi transport
Others
AP-1 complex
111790023
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
111790023
NCBI-ProteinID:
XP_023526557
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Position
LG01:complement(9066421..9082719)
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AA seq
876 aa
AA seq
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MNPFSSGTRLRDMIRAIRACKTAAEERAVIRKECAAIRASIDENDHDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIRKVPDLAENFVN
PAASLLKEKHHGVMITGVQLCTELCKHSSEALEYFRKKSTEAMVKTLKDLVNSPYAPEYD
IAGITDPFLHIRMLRFLRVLGQGDADASDCMNDILAQVATKTESNKNSGNAILYECVETI
MSIEDSGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAITVDAQAVQRHRATIVECVKD
SDASIRKRALDLVYLLVNESNVKPLTKELIEFLEVADQEFKGDLTAKICSIVAKYSPEKI
WYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAFQRSSEQQESLLRV
AVWCTGEYGDMLVNNIGMLDIEDPIVVTESDAVDVAETAIKRIGSDLTTKAMGMIALLKL
SSRFPSCSERINNSIVQYKGSLVLELQQRSIEFNSIIASHHKMRSVLVERMPVLDEATFI
GKRAGSMTGSVSTSNAAAINLPNGVSKSSAPLVDLLDLSSDDVPVPSSSGGGFIQDLLGL
DLSAAPEKSGSNPTPISGTDVLLDLLSIGTSPPAQSTAPATDILSNQEKSPTSQLDGLSS
LSSLPANKPSAAVSSPTIDLLGGLSPNLASADENGSVYPSIVAYESGSLRITFDFSKTAG
NPQTTLILATFKNLSPNSYTNFIFQAAVPKFLQLHLDSASASTLPGSGNGSITQNLRVTN
SQYGKKHLVMRLRIAYKVDDKDVLEEGQVSNFPRNL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttctcctcagggacgcgtctcagggacatgattcgggccattcgtgcttgc
aaaactgcagctgaggagcgtgcagtaattcgaaaagagtgtgctgctattcgagcttcc
atcgatgagaatgatcatgactataggcatcgaaacctcgcgaagctcatgttcattcat
atgcttggttatcccacgcattttggtcaaatggaatgcttgaagttgattgcatctgct
ggttttccagaaaagagaattgggtatcttggtctcatgttacttctagatgaaagacaa
gaagtgctgatgttggtcacaaactcattaaaacaagatctcaaccactcaaaccagtat
atcgtaggacttgctctttgtgctttaggaaatatttgttcagctgaaatggctcgtgat
cttgcaccagaagttgaaagattgttacaattccgagatccaaacattaggaagaaagca
gcattgtgttcaattaggattataaggaaagtaccagaccttgcagaaaattttgttaac
cctgccgcctccttactgaaagaaaagcaccatggggttatgataacaggagttcaactg
tgtacagagctttgcaaacacagctcagaagcccttgaatattttcgaaagaagtcaaca
gaggccatggtcaagacactgaaggatttggttaatagtccatatgcccctgagtatgat
attgccggaataacggacccatttcttcacatccggatgcttagatttttgcgtgtcttg
ggtcagggagatgcagatgctagtgactgcatgaatgatatacttgcacaggtggcaaca
aaaactgaatcaaacaaaaattcagggaatgctatactatatgaatgcgttgaaactatt
atgagtattgaagatagtggtggcttgcgtgtacttgcaatcaatatcttgggaagattc
ttgtctaatcgtgataacaatatcagatatgtagcattgaacatgcttatgaaggctatc
acagtagatgctcaagcagttcagagacatcgggcaactatcgtggaatgtgtaaaggat
tcagatgcttcaatccggaaaagggcccttgatcttgtttaccttctagtgaatgagagc
aacgtcaagcccctgaccaaagagcttattgaattcctggaagttgctgatcaagaattt
aagggagatcttactgcaaaaatttgctcaattgttgcgaagtactccccagagaaaata
tggtacattgatcagatgctgaaggttctctctgaggctggaaattttgtaaaagatgaa
gtatggcatgcccttattgtcgtgataagcaatgcatctgacctccatgggtatactgta
agggccctgtacagagcatttcagagatctagtgagcagcaggaaagtcttcttcgagtg
gcagtttggtgcaccggagaatatggcgacatgttggtcaataatattggaatgcttgat
atagaggatcccatagtagtaacagaatctgatgctgtggatgttgccgaaactgctatt
aaacgcattggctcggatcttaccaccaaagcaatgggcatgattgctttgctgaagctc
tcttctcgtttcccatcatgttcagagaggatcaacaattcaattgttcaatataaagga
agcctcgtgcttgaattgcagcaaagatccatcgaattcaattctatcattgcaagtcat
cataaaatgaggtctgtgttagttgaaaggatgccagttttggatgaggcaacgttcatt
ggaaaaagggctggttctatgacaggatcagtatcgacttccaatgctgctgcaattaac
cttccaaatggagtttctaaatcttctgctcctctcgtcgatttacttgatctaagttca
gatgatgttcctgtgcctagctcttctggtggtggttttattcaggatcttcttgggctt
gatttgtccgcagctccagagaaatctggaagtaatccaactccaataagtggaactgat
gttctgttggatcttttgtcaattggaacatcaccacctgcacagagcactgcgcctgca
actgacatattatctaatcaagaaaaatcgcctacttctcaattggatggactctcctct
ctttcttctcttccagcaaacaaaccttctgctgctgtatcttctcctacaattgattta
ttgggtggactgtcccctaacttggcaagcgcagatgagaatggttcagtttatccatct
atagttgcatacgagagtggatcactgagaataacttttgacttctctaagacagctggg
aacccacagacgacattgatccttgccacatttaaaaacttatctcctaatagctataca
aattttattttccaggcagcagttccaaagtttcttcaactgcatttagattcggctagt
gctagtactctgcctggaagtggtaatgggtctatcacacaaaatttgagagtgactaat
agccaatatggaaagaaacatcttgtgatgcgcctaaggatagcgtacaaagtggatgac
aaagatgttttggaggagggtcaagtcagtaatttccctcgtaacttgtga
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