Cucurbita pepo subsp. pepo (vegetable marrow): 111790053
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Entry
111790053 CDS
T05351
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111790053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111790053
Spliceosome [BR:
cpep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111790053
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
111790053
NCBI-ProteinID:
XP_023526610
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Position
LG01:9114771..9118498
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AA seq
484 aa
AA seq
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MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT
QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV
ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS
TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK
IRKN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctactttggctgattcttttctagcagatcttgatgaactctctgatgaagacaat
tttctggatgaagaagatgctgatgccgaaaatatggaagaggatattgatggggatctt
gcagatctagaaagccttaattatgatgatctggatagtgtatcaaaattgcagaaaaca
cagagatacaatgatattatgcagaaagtggcagatgcattggagatggattctaatgtc
tcaaatcagggatttgtattagaagatgatcctgagtaccaactgattgtagagtgtaat
gccttgtcagtggatattgagaatgagattattattattcacaattttatacgtgataaa
tatcgactaaaatttccagagcttgaatcacttgtgcaccatccaatcgattatgctcga
gttgttaagaagattgggaatgaaatggatttgactcttgtagatttagaagggctttta
ccctctgctgtcattatggttgtctctgttacagcatctaccacaagtggcaagccactt
ccggaggaaattctccagaaaacaattgatgcatgtgatcgagctcttactttagattcg
gcaaagaaaatggtccttaattttgttgaaagtagaatgggatatattgcaccaaatctt
tcagcgatagttggaagtgctgttgcagcaaaactaatgggaactgctggtggtcttgtt
gccttagctaagatgcctgcttgcaatgttcagcttcttggtgcaaagaaaaaaaacctt
gctgggttttccacagcgacctcacaatttcgagtaggttatattgagcaaactgagata
ttccaatcaacacctcctcctttgaagatgcgtgcttgtcgactcatagcggcaaagtca
acacttgcagcacgagttgactccaccaggggtgaccctacaggaaagactggtagagtc
ttcaaagatgagatccttaagaaaattgagaagtggcaagaacctccacctgcaaaacaa
ccaaaacctcttccggtccctgattctgaacccaaaaagaagagaggtggccgtcgatta
aggaagatgaaggaaaggtatgcaacaacggagatgaggaagctagctaacaggatgcag
tttggggtgcctgaagagagttctttaggagatggattgggggaagggtatggaatgctt
ggtcaggctgggagtggcaagttgcgtgtgtcagctgctcagagcaagcttgccgcaaaa
gttgttaagaagttcaaggaaaaacgctatggaagcagtggtgctacatccgggctgacc
tcaagtttggcatttactccagtacaaggaatcgagctgtcgaatcctcaggcccatttg
aaccagctaggcggtggaactcaaagcacctacttttctgaaacaggaacattttcaaag
attaggaaaaactga
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