KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111790131
Entry
111790131         CDS       T05351                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013  Nucleocytoplasmic transport
cpep03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111790131
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111790131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpep03016]
    111790131
Transfer RNA biogenesis [BR:cpep03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    111790131
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th IBN_N
Other DBs
NCBI-GeneID: 111790131
NCBI-ProteinID: XP_023526726
LinkDB
Position
LG03:complement(4064171..4102842)
AA seq 1017 aa
MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDRVQIPLSSFV
PDLEVEFFAAQILKRKIQNEGHLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDNQNADCKISSSCRSQ
YARELLLHTPMVLEFLLQQSEKGFDCGTQMQEKNRKILRCLLSWVRVGCFSEIPQGSLPT
HPLLNFVLKSLQDATSFDLAIEVLVELVSRHEGLPQVLLCRVHFLKEMLLFPSLSSGDEK
VISGLACLFSEVGQAAPSLIVDASAEALALADALLSCVAFPSEDWEIADSTLQFWSSLAS
YILGCDENNSANRKHVEDVFLSVFSALLDGLLLRIQVVESAFNEERGMIDLPDGLIHFRM
NTVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVAEVVLQEGQSF
DFSVITQLVTMLSARPSNEIKGIMCLVYRSLAEVVGSYFRSISAFHTDARPLLLFLATGI
TESVSSHACAFALRKICEDATAVIFELQNLEILIWIGESLEKLHLPLEDEEEVVSAVSLI
LGSVPNKELKSNLLARLLSSSYEAIEKLVDEDNAQSLRQNPATYTKILTSAVRGLYRMGT
VFSHLATSLSTEHTPDDPMFSLLIVFWPMLEKLLRCEHMENGNLSTAACRALSLAIQSSG
QHFVTLLPKVLDCLSTNFVLFHGHECYIKTASVIVEEYGHHQEKFGHLFITTFERFTYAA
SVNAINSSYICDQEPDLVEAYANFASIFLRCSHKEILAASGSLLEVSFQKAAICCTAMHR
GAALAAMSYLSCFLDVSLASMLEFASTNSEGSFNSMVIHVLSHSGEGLVSNILYALLGVS
AMSRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETL
VPLWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNILNVI
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggaattgcgaatgaaagtctctcaagcagttcacgtcctaaatcatgatacccaatct
tgcaaccgcgtggcagcaaatcaatggttagtccagtttcaacagaccggtgctgcttgg
gaagttgccactgctatccttacctctgatcgtgttcaaattccgctgtcctcctttgtc
cctgatttggaagtcgagttctttgctgctcagattcttaaacgcaagatccagaatgaa
ggccatctcttacaattaggagtaaaagatgctctactaaatgctcttcttgtggctgcc
aaaaagtttagttcaggccctcctcagcttttaactcagatctgtcttgcactctctgcg
cttattctgagaacagtagagcatgggaaacccattgatcgtcttttctacagtcttcag
aatctgcagagtgtggacaacggcaatttggccgttttggagatgcttactgttttacct
gaagaagttgttgacaatcaaaatgctgattgtaaaataagttcatcctgtaggagccaa
tatgcccgagagcttctattgcacactcctatggttcttgagttccttctgcagcaatct
gagaaagggtttgattgtgggacacagatgcaggaaaagaacagaaaaattcttcgatgt
ttgctgagttgggtacgcgttggttgcttctctgagatacctcagggttcattgccaacg
catccccttcttaattttgtgctcaaatccttgcaggatgcaacttcctttgatttggct
attgaagttcttgttgagcttgtgagtagacatgaggggttaccccaggtcttgctgtgc
agagtacattttctaaaggaaatgcttctttttccctctcttagtagtggagatgagaaa
gtaatcagtggtcttgcatgcttgttctcagaagttgggcaagcagcaccatccttaatt
gtcgacgccagtgctgaagctcttgctctagctgatgctctcttgagttgtgtggctttt
ccaagtgaagactgggagattgctgactcaacattgcaattctggtcttctcttgcaagc
tacattcttggctgtgatgagaataattcggcgaataggaaacatgtggaagatgtattt
ttgtctgtattttcagcactgcttgatgggcttctattacggattcaggtggttgaatct
gctttcaacgaggaaagaggaatgatagacctacctgatggtcttatccattttagaatg
aataccgttgagcttctagtggatatttgtcaaattttaaggtcttccagatttatggaa
aagctcttcttcagcggttggactaatggtaatgtaccaatcccttggaaggaagtggag
agcaagttatttgctcttaatgtggttgctgaggtagtcctacaagagggtcagagcttt
gatttctctgttatcacgcaactggtgaccatgctgtctgctagaccgtcaaatgagatt
aaaggaataatgtgccttgtttatagatccctagcagaagttgttgggtcttactttagg
tcaatatctgcttttcacactgatgccagacccttgttattgtttcttgctactgggatc
acggaatctgtttcttcacatgcttgtgccttcgccctccgtaaaatttgtgaagatgca
accgctgtaatctttgaactgcaaaatttggaaattttgatttggattggagagagtctg
gagaagttgcatttacctttggaggacgaggaagaagtagttagtgctgtaagtttgatt
cttggttcagttcctaataaagaactgaagagcaacttgttggctagactgctttcatca
agctatgaagcaattgagaaactagttgatgaagataacgcacagtctctgagacagaat
cctgctacttacacgaaaatcttaacctccgctgtgagaggcctgtataggatgggaact
gtatttagccatctagctacgtctttgtcaaccgagcatactccagatgatcctatgttt
tctttgttgatagttttttggccaatgctagagaaacttctaaggtgtgaacacatggag
aatggtaatctctctacggcagcttgtcgtgcgctatctctagccatccagtcctcaggt
caacacttcgttacgttgctgccaaaagtcttagattgcttatcgacaaattttgttttg
ttccatggtcatgaatgttacattaaaacagcttcagttattgttgaagaatatggccat
catcaagaaaaatttgggcatttgtttatcaccacttttgaaaggtttacttatgcagca
tccgtaaatgctattaattcctcgtacatatgtgaccaagaacctgatttggtggaggct
tacgcaaattttgcatcaatttttctccgatgctctcataaggaaatattagccgcatct
ggttctcttttggaggtttcattccagaaagctgctatatgttgcacagccatgcatcgt
ggggcagcattagcagcaatgtcatacctatcttgtttcttggatgttagtcttgcatca
atgttagaatttgctagtaccaattctgagggatcattcaattctatggtaatacacgtt
ctatcccacagcggcgagggacttgtatcaaacattctatatgctttgcttggtgtttca
gcaatgtctcgggttcataagtgtgcaacagttctgcaacagttggcagcaatttgcagt
gtcagtgaaagaacggacttgaaagctgtcctgcgctgggaatctttgcatggctggcta
ctatcagcggtgcaggctctcccactggaatatttaaaaccaggggaagtagaaactctt
gtaccactatggttaaaggcgcttggagatgcagcctgcgactaccttgaaagtaaaagt
tgtgatgaattaaagactaattatggacatatgcaagggaagggtggaagagtcttgaag
cgtctagttcgtgaatttgctgatggtcaccgcaatattcttaatgtgatttaa

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