Cucurbita pepo subsp. pepo (vegetable marrow): 111790178
Help
Entry
111790178 CDS
T05351
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111790178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111790178
Spliceosome [BR:
cpep03041
]
Complex C
Other components
Step II factors
111790178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
111790178
NCBI-ProteinID:
XP_023526785
LinkDB
All DBs
Position
LG03:11884513..11890008
Genome browser
AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGAMTHDSKSCMERPRKVGAKW
TSMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERYEARDEARRKFLKEQQLKKLE
EKNNKQIEDAEVSDEDEDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFYVGDNQNRISGQALDFKQLNV
HAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSHTKDAILEKYGNAATEGNLPREL
LLGQSERQVEYDRAGRIVKGLEMALPKSKYEEDVFINNHTSVWGSWWKDHQWGYKCCKQT
IRNSYCTGAAGIEAAEAAADLMKSNIARKASSEDTPAPAEEKKLATWGSEIPDDIVLDQK
KLTESLKKEDERRKEEKDERKRKYNVRWNDEVTAEDMEAYRMKKVHHDDPMKDFLN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcagttgctttcaaatctagggaggatcatcgcaaacaactggaatta
gaggaagcacgtaaagcagggcttgcaccagctgaggttgatgaagatgggaaagaaatc
aaccctcacattcctcaatatatgtcctctgcaccttggtatcttaatgctgagagacca
agtttaaaacatcaaaggaaatggaaatcagatccaaattatacaaaatcctggtatgac
agaggtgcaaaaatacatcaggcagacaagtataggaagggtgcgtgtgaaaattgtgga
gcaatgacacatgattcaaagtcatgcatggaaaggccccgaaaggtaggagcgaaatgg
acaagcatgcatatagcaccagatgaaaagatagagacatttgaactagattatgatgga
aaaagggatcgttggaatgggtatgatccagcaacctatgctcgtgtcattgagaggtat
gaggctagagatgaagcaaggagaaaatttttgaaagaacaacagctgaaaaaattggaa
gagaaaaataacaagcagattgaagatgctgaagttagtgatgaagatgaggacgaagat
gatttgaaggttgatgaggcaaaggttgatgaaagcaaacaaatggactttgcaaaagtt
gagaagcgtgttcgtactacaggtggtggaagcacgggaactgtaaggaacttgcgtatt
cgggaggatacagccaaatatcttttaaatcttgatgtcaactctgcttattatgatccc
aaaactcggtccatgcgtgaagatcctcttcctgatgccgatccaaacgataaattttat
gtgggtgataaccaaaatagaatcagtggacaagctttggacttcaagcaactcaatgtg
catgcttgggaagcgtttgacaaaggacaagatatccatatgcaagctgctccttcacaa
gctgaacttctgtataagaactataaggttattaaagagaagttaaagtcgcatacgaaa
gatgccatcctggagaagtatgggaatgctgccactgagggaaatctgcctcgggaactt
ttactgggacaaagcgagaggcaagttgaatatgaccgtgctggcagaattgttaaaggc
ctggagatggctcttcccaaaagtaaatatgaggaagatgttttcattaataaccacacg
agtgtttggggctcatggtggaaggatcaccagtggggatataaatgctgtaagcaaacc
atccggaacagttattgcactggggctgctggaattgaggctgctgaggcagcagcagac
ttaatgaagtctaatattgctcgtaaagcatcttctgaagatacaccagccccagctgaa
gagaaaaagctggcaacttggggaagtgaaatacccgatgatattgtcctcgaccagaag
aagcttactgaatctctgaagaaggaggatgaaagaaggaaggaggagaaggatgaaaga
aagcgtaaatataacgtgagatggaatgatgaggtaactgcggaggacatggaggcttat
aggatgaaaaaggtgcatcatgatgatcccatgaaggattttcttaactaa
DBGET
integrated database retrieval system
