Cucurbita pepo subsp. pepo (vegetable marrow): 111790247
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Entry
111790247 CDS
T05351
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111790247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111790247
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111790247
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
SLATT_3
Motif
Other DBs
NCBI-GeneID:
111790247
NCBI-ProteinID:
XP_023526877
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Position
LG03:13446852..13451475
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AA seq
730 aa
AA seq
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MGSQIPKSTRFGHPTSDFHDKYGSYQNGSRLSPGSILESIERKFSSAYKSSRRIITHFSF
KHPGDQSVKKPKFRKKILDPQKPFLQQWNKIFVLSSVIAVAVDPLFFYIPVINGERQCLT
IDRQLMIIACVLRSVMDLFYVLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSN
FLIDILSVLPLPQLLVLAIIPAAKGPIPLKTKDVVKIAVLLQYVPRLLRIYPLYREVTRT
VGILTETAWSGAAFNLLIYMQVSHVVGAIWYLLSVERQAKCWVEACRKGKCKDNFLYCGN
QRRQIHPYIDQYCSPKESEDEKTFKFGMFVEALKFQLTSTTSFRRKFFYSFWWALRNVSS
SGQNLQVSNYMGDVFFAVFIAILGLVLFALLISNIQKYLQSATVKVEQMRINRRDAEHWM
AHRMLPEDLRQRIRRYDQYKWQLNRGVKEEELIGNLPKDLRRDIKRHLCYALLKKVPLFS
GMDKQLLDAMCEYLKPVLFTEKSFILQEGDPIDMMLFIMKGKLATSITYGWKNNTFSGVL
NAGDFCGEELVQWARDPTSTSLPISSRTVKSLTEVEAFALKANELKSVTSQFHFQRLNSK
QFQLSVRFYSHQWNVWAAYKIQEAWQEYRERKRRGVRGDGRFQDALAKMAGASVGFGATL
YASIFISHLLQVVQRDQPQETAQLTRVMTLPPPPKPDDEPDSPNFTILNRNTTKQQTSNS
ISSKVCKSSV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcagataccaaaatctacaaggtttgggcatccaacttctgattttcatgac
aaatatggaagttatcaaaacggaagcagactgtctccagggtcaatattggagagcata
gaaagaaaattttcaagtgcttataagagctctagaagaataataacacacttcagtttc
aagcatccaggtgatcagtcagtaaagaaaccgaagttccggaagaaaattcttgatcca
cagaagccatttcttcagcaatggaacaagatatttgtgctctcttctgtcatagcagta
gctgtggatcctctcttcttttacatcccagtgatcaacggagaacgtcaatgcctaacc
atagaccgacaacttatgatcattgcttgtgttcttcgttcagtcatggacttattttat
gtacttcacatgatctttgaatttcgaacgggttttcttcccccttctttaccagtattt
ggaagtggagaattaatcgaagatccagcagctatagcaaagagatatctcttctcgaac
ttcttgattgatatcttatccgttctcccactgcctcagcttttggtattagcaatcatt
cctgcagcgaaaggcccgattccattaaagacaaaggatgttgtgaagattgcagttctt
ttgcaatatgttccaagacttctccgaatctatccactatacagagaagtaaccagaacg
gttggcatactgacagaaacagcctggagtggagctgccttcaatctccttatttatatg
caagttagtcatgttgttggtgccatttggtatttgttatcagtagaacgacaagccaaa
tgctgggtcgaggcctgcaggaaaggtaagtgtaaggacaattttctgtactgtggaaat
caaagaagacaaatacacccgtacatagatcagtattgctcccctaaggagtctgaagat
gaaaaaaccttcaagtttgggatgtttgttgaagcccttaagtttcaattgaccagtacg
acgtcttttcgccgcaaattcttctattccttctggtgggctctgagaaatgtcagctct
agtggacaaaaccttcaagtaagcaattacatgggggacgttttttttgctgtcttcatt
gccattcttggtttggttttatttgcgttactcattagcaatattcagaaatatctgcag
tcagcaactgttaaagtagagcagatgagaattaaccgaagagacgccgagcattggatg
gcacatcgtatgctcccagaggacttgaggcagcgtattcgacgatatgatcagtacaaa
tggcagctaaacaggggagttaaggaagaggaactcatcggtaaccttcctaaagacctc
aggagagacatcaaacgccatctttgctatgcccttctaaagaaagtgccactttttagc
ggcatggacaagcaactgttggacgcaatgtgtgaatatctcaagcctgtgttattcaca
gagaagagcttcattctgcaagagggtgacccaatagatatgatgctatttatcatgaaa
ggaaagttggctaccagtattacttatggttggaaaaacaacactttctcgggcgttctt
aacgcaggtgacttttgtggtgaagaactagttcaatgggcaagggatccaacctccact
tcccttcccatttcaagcagaacagttaagtctcttactgaggttgaagcctttgctcta
aaggctaatgagttgaaatctgtaactagtcagttccacttccagcgtctcaatagcaag
caattccaactctcagtcaggttctactcccatcaatggaatgtttgggcagcctacaaa
atacaagaagcttggcaggagtaccgtgaaagaaagcggagaggggtgagaggagatggc
aggtttcaagatgcattggccaaaatggctggcgcctcggtgggctttggcgccactctg
tatgcatccatattcatatcccatctactgcaagtggtgcagcgtgatcaacctcaggaa
actgcccaactcacccgagtgatgacactaccgccgcctccaaagccagacgatgagcca
gacagcccaaacttcacaatcttgaatcggaacacaacgaagcaacaaacatcaaattcc
atctcaagtaaagtttgtaaatcttctgtttga
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