KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111790339
Entry
111790339         CDS       T05351                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1-like isoform X1
  KO
K11797  PH-interacting protein
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111790339
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111790339
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Bromodomain Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_DCAF4 VPS8_N Beta-prop_HPS5 WD_LRWD1 Auxin_resp WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Agenet
Other DBs
NCBI-GeneID: 111790339
NCBI-ProteinID: XP_023526978
LinkDB
Position
LG03:10823047..10840011
AA seq 1718 aa
MTNMALRKFVCGATPSINLKHSSFPAKVHEQAQFEEPETNQTLEPDVEIDPREVYFLIMH
FLSSGPCRRTCGLLWDELFENQLLPRRYHAWYSRNGMHSGHENDDGLSFPLSYQHLVERY
PHVDKNHLIKLLKQLMLNKAPPSRGMSGAIAPNAADVPTLLGTGTFSLLSYDKNDGVGKP
SGPPSHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKR
LRGHRNAVYCASFDRMGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA
VVASSSNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRAAYQLLSSSDDGTCRLWDAR
SSSQNAPRIYVPRPLDSVTARNGGSSASTLPQSHQIFCCAFNACGTIFVTGSSDTLARVW
SACKGNNDNPDQPNHEIDVLAGHENDVNYVQFSGCAVASRFTTTDIVKEDNVHKFKNSWF
TYDNIVTCSRDGSAIIWVPRSRRSHGKVGRWTRAYHLKVPPPPMPPQPARGGPRQRILPT
PRGVNMIIWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAM
SAGYDGKTIVWDIWEGTPIRIYEISHFKLVDGKFSSDGTSIILSDDVGQLYILSTGQGES
QQDAKYDQFFLGDYRPLIQDPFGNVVDQETQLSTYRRNLQDLLSDSGMIPYPEPYQTAYQ
QRRLGAMGLEWRPSSLKLSTGPDFNLDPDYQLLPLADLDMLIEPLPEIVDAMDWGPENEV
QSDDTDSEYNVTEDYSTGGEQRSLNSNCSTDSECSSDDTGIDDGLRRSKRKKQKAYMEVM
TSSGRRVKRRNMDEYEGDTVRNSRNRKSKSGHRASKKKSASKSLRPQRAAARNARNWISS
FKGKCTDGEDEYESGGDCSESESTLEDSDIESDEYERSLQNRNKHSKGKEVFLDEAELIT
KPLDIPESRVDSGNRKKLILKFSLKNPNKVDPPSNTTLTCTNMADVASSSSRSPKEVIET
SQNLMRSERQFGNTDGHSDLTEVYTNGNIRWGGSKVRSSKRIRLDAYALSSPFRNGDHNE
NENTVHEYLERENHFGAPSPHSKIQNYCADETHAVSLTNLKDDDDNASGHSPEMVNGGEL
KCVSNSKSCDDHDDSNNLNFMFSSDATTSIQYGTPAPEKTENIAPMCTKIRLKSSSLDPE
HSLKHKIESLDENSKNDEYYTVSGSPRRLNGLQDTVMNEAFSDLRNDCPQDMDTAMDEKP
ISTLCNSSELQAVETNKMYTAVYRRSKSNKGKSNLESNGCDSGEHALGNIGLSAEANNHK
SMLRKTRSLRFKDSYDPNNVCDDLKSDEDQELEQKSRRSGNSPANRSHIPSEEWGSSSRM
TVGSRSTRNRRGSLTQDLNPVDRRKSVQYARKGSWLMMPAHEGGSRYIPQLGDEVAYLRQ
GHQEYIDHCCANYCHTKDMGPWTATRGTIRAVEFCKVVELVYSTSAGSGDSCCKMLLKFI
DPASSVYLQSFKLTLPELTSFPDFLVERTRFEAAMQRNWTFRDKCKVWWKNDVGVDGSWW
DGRIVSVQPKSSEFPESPWERYTIKYRSDPAEPHLHSPWELYDIVTQWEQPRIDDENKAK
LSTAFDQLMSAPMQGRYGIQDLMLLSRKTQFKNRFPVPLCLEIIQERLQNDYYRNLEALK
HDFMVMLSNYESFVAKNEDMSKKIRRLSDWFNRNISPL
NT seq 5157 nt   +upstreamnt  +downstreamnt
atgactaatatggctcttcggaagtttgtttgtggtgctacaccttctattaacttgaaa
cattcaagttttcccgctaaggtgcatgagcaagctcaatttgaagaacctgagactaac
cagacgttggagcctgatgtagaaattgaccctagagaagtttattttcttattatgcac
tttctttcatctgggccatgtcgtagaacttgtgggctgctctgggatgagctttttgaa
aatcagcttttaccccgacgatatcatgcttggtattcaagaaatgggatgcatagtggg
catgaaaatgacgatggcttgtcatttccattaagttaccaacacttagtggagaggtat
ccacatgtcgataagaatcacctgataaaacttttgaagcaattgatgcttaacaaggcc
cctccatctaggggtatgagtggtgcaattgctccaaatgcagcggacgtacctacgtta
ttgggaacgggcacattttcacttctgagctatgataaaaatgatggagttggcaaacca
agtggtcccccatcccacatgcgttggcctcatatgaaagctgattctgttcgtggatta
agtttgagagaaattggaggtggtttctcccgacatcaacgtgctccttctgtgcgtgca
gcatgttatgcaattgctaagccatcaacaatggtgcagaaaatgcaaaacataaagagg
ctacgagggcatcgtaatgctgtttattgtgcaagttttgatcgcatgggaaggtatgtt
ataactggttcagatgatcgccttgtaaagatttggtcaatggaaactgcatattgcttg
gcaagctgccgaggacatgagggtgatatcactgaccttgctgtaagttctaacaatgct
gtggtggcgtcatcttcaaatgattttgttattcgtgtttggcgtttgcctgatgggctg
ccaatttcagtcttacgaggacatactggtgctgttactgcaattgcctttagtcccaga
gctgcctatcagcttctttcatcgtcagatgatggaacgtgtaggttatgggatgctcgg
agctcttctcagaatgctcctcgtatttatgttccaaggcctttggactctgtgactgca
agaaatggtggctcttctgcgagtactcttcctcagagtcatcaaatattttgctgtgca
tttaatgcttgtggcactatttttgttactggtagttctgacactctagcaagggtttgg
agtgcctgtaaaggaaacaatgataacccagaccaaccaaaccacgagattgatgtgtta
gctggccatgagaatgatgtcaattatgtgcaattcagtggatgtgccgtagcatcaaga
tttacaactactgacattgtgaaggaagacaatgttcacaagttcaaaaactcctggttc
acttatgacaacatagttacttgttctcgtgatggcagtgcaattatttgggttccaagg
tcacggaggtcacatgggaaggtaggtcgctggacccgtgcataccatttaaaagtgcct
cctccacccatgcccccacaacctgcccgaggcggccctcgtcagaggattcttcctacc
cctcgtggtgtaaatatgataatttggagcctagataatcgttttgtcttagcagctata
atggattgtagaatttgtgtttggaatgcctctgatggcagcttagtgcactctttgacg
ggtcatactgaatctacgtatgtactcgatgttcatccttttaatccaaggattgctatg
agtgctggatacgatggaaaaacaatagtttgggatatttgggaaggcacgccaattcgg
atatatgaaatttctcatttcaaactggttgatgggaagttttcttcagacgggacatca
attatactttcagatgatgttgggcagctatatatattaagcaccgggcagggagaatcc
caacaggatgccaagtatgatcagttctttcttggtgactatcgcccacttattcaggat
cctttcggcaatgtagttgaccaagaaacccaactcagtacttacagacggaatttgcaa
gatctcctttctgactcaggcatgataccttatccagaaccttatcagactgcatatcag
caaagacgtttaggtgctatgggtcttgagtggcgtccctcttctctaaaactttctact
gggcctgacttcaatctcgacccagattaccaattgctgccattggcagacttggacatg
ttgattgaaccattgcctgagattgtggatgcaatggattggggaccagaaaatgaagta
caaagcgatgatactgattcggaatataacgtcaccgaggattactctactggtggggag
caaagaagcctaaattcgaactgctcaacggattcagaatgcagctccgatgacacaggg
attgacgatggtcttcgaaggtcaaaaaggaaaaaacagaaagcatacatggaggtcatg
acttcttcaggaaggcgtgttaaaagaagaaatatggatgagtatgaaggtgatactgtt
aggaattccagaaatcggaagtcaaaatctggccatagagcatccaaaaagaaatcagca
tctaagtcattaagacctcaaagagcggctgcacgtaatgctcgcaactggatatcatcg
tttaagggaaaatgtacagatggagaagatgaatatgagtcgggaggtgattgctcagaa
agtgaatctacattagaagattcagacattgagagtgatgaatatgaaaggtcattgcaa
aacagaaataaacattcaaaagggaaagaagtattccttgatgaagctgagttgattaca
aaacctctcgacattcctgaatctcgtgtagattctggaaacagaaagaagttgatcctt
aaattctcccttaagaatccaaataaggttgatcctccttcaaacacaacacttacttgc
accaacatggctgatgtggctagctcatcatcaagatcaccaaaggaagttattgaaacc
agtcagaatcttatgagatccgagagacaatttggaaatactgatggacattctgatctg
actgaggtctacacaaatgggaacataagatggggagggtccaaggttcgatcgtccaag
cgcataagattagatgcatatgcattatctagtccatttcgcaatggcgatcataatgaa
aatgagaatactgttcatgaatatttagaacgagaaaatcattttggtgcaccatccccc
cattcaaagatacagaattattgtgcagatgaaacacatgctgtatccctgacgaatttg
aaagatgacgatgataatgcttctgggcactctcctgagatggtcaatggtggtgagctt
aaatgtgttagcaacagcaaatcatgtgatgatcatgatgattcaaataatttgaatttc
atgttttcttcagatgcaaccacatcaatacaatatgggactcctgctcctgagaaaact
gaaaatattgcaccaatgtgtacaaagataaggttgaagagtagttctttggatcctgaa
cattctttgaagcacaaaatagaatccttagacgaaaactcgaagaatgatgaatactat
acagtatctggaagcccacggcgtctgaatgggctgcaggatactgtcatgaatgaagcc
ttttctgatctaagaaatgattgcccacaagatatggacactgcgatggatgaaaaacca
atatcaaccttatgtaactcatcagagttgcaagcagttgagacaaacaaaatgtacact
gctgtttatagaagatctaagtcgaacaaaggaaagagcaatctagaaagcaacggttgt
gactcaggggaacatgcattgggcaacattggtctgtctgctgaagcaaacaatcacaaa
agtatgcttcgtaagacacgatctttaaggttcaaggactcatatgatccaaataatgtg
tgtgatgatctgaaatcagatgaagatcaagaacttgaacagaaatcaagacgttctgga
aattctcctgcaaacagatcccatataccaagtgaagagtggggatcaagctcaaggatg
acagttggatccagatccactcgaaacagaaggggtagtcttactcaagacctaaatcct
gtagatagaagaaagtcggttcaatatgccagaaaaggatcatggttaatgatgcctgca
catgagggtggctcgagatatattccccaacttggagatgaagttgcatatctgagacag
ggtcatcaggaatacatagatcactgttgtgcaaattactgtcacacaaaagacatggga
ccttggaccgcaacccgaggaaccatacgagctgttgagttctgtaaggttgtggagctt
gtttattcaacttctgcaggttccggagatagttgctgtaaaatgctactcaagttcata
gatcctgcttcctctgtatacctccaatctttcaagttaaccctacccgagttgactagt
ttccctgacttcttagtcgaaaggactcggtttgaagcagcaatgcagaggaattggaca
ttcagggacaagtgcaaagtgtggtggaaaaatgatgttggagtagatggtagttggtgg
gatggtcggattgtctctgtgcagccaaaatcttcagagtttccagaaagtccttgggaa
aggtacacaattaagtataggagtgatcctgcggaaccacatttacatagtccttgggag
ctttatgatattgttactcagtgggaacagcctcgaatagatgacgaaaacaaagcaaag
ttgtcgactgccttcgaccaattaatgtcggcccctatgcagggccgttatgggattcaa
gatctgatgcttctctcacggaagacacaattcaagaacaggtttcctgtaccattgtgc
cttgagataatccaggaaagattacagaacgattactaccgaaacttggaggctttgaag
catgacttcatggtaatgctatcgaattacgagtcgttcgtggctaagaacgaagacatg
tcgaagaaaattagacgcttgtcagactggtttaatcgcaacatatcgcctttatag

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