Cucurbita pepo subsp. pepo (vegetable marrow): 111790454
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Entry
111790454 CDS
T05351
Name
(RefSeq) TBC1 domain family member 22B-like
KO
K20360
TBC1 domain family member 2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111790454
Membrane trafficking [BR:
cpep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
111790454
Retrieval pathways
111790454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Get2_like
Motif
Other DBs
NCBI-GeneID:
111790454
NCBI-ProteinID:
XP_023527117
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All DBs
Position
LG03:9802019..9807664
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AA seq
454 aa
AA seq
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MKNSGNDSLGAEDRQPKESTISNLDSRFNQTLKNVQGLLKGRSIPGKVLLTRRADVLDSS
SVSDQPSNYSRSLSDNDTGTSNHIAKSEEEDLQIINNNSIVNKSKSSTSNTEDLTKEVQK
PIMGARATDSARVMKFTTLLSGTTIILDKLRELAWSGIPPYMRPNIWRLLLGYAPPNSDR
KEGVLRRKRLEYLDSVAQFYDVPDTERSDDEINMLRQIAVDCPRTVPDVAFFQQAQVQKS
LERILYTWAIRHPASGYVQGINDLATPFLVVFLSEYLEGGVEKWSISDLSPDKITNIEAD
CYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHMEEQGLEFLQFAFRWF
NCLLIREIPFHLVTRLWDTYLAEGDSLPDFLVYIFASFLLTWSEELQKLDFQELVMFLQH
VPTQNWTHQELEMVLSRAFMWHSMFNNSPRHLIS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagtggcaatgacagtcttggcgctgaagatcgacaaccaaaagagagcaca
atctcaaatctcgattctagattcaatcagaccctaaaaaatgtacaagggctgcttaaa
ggccgcagtattcctggtaaagtattgctaactagaagagcagatgtgctcgactcctcg
agtgtatcagatcaaccgtcgaattattcaaggagcttatcggataatgatactggtaca
agcaatcacattgccaaatctgaggaggaagatcttcagattataaataataattcaatt
gttaataagtcaaaatcatcgacatctaacactgaggatcttactaaagaagtccaaaag
ccaataatgggtgctagagcaacagattctgcaagggtgatgaagttcacaacgctgctc
tcggggacaacaatcatattagacaagttgcgggagctagcgtggagtggcattccccca
tatatgcgcccaaatatatggaggcttcttttgggctatgcaccacctaattcagataga
aaggagggagttctacggagaaagagactcgagtatctcgacagcgttgcacagttctat
gatgttcctgatactgaacgttctgatgatgagataaacatgctccgccagattgctgtt
gattgtcctagaactgtacctgacgttgctttctttcaacaagcacaagttcagaaatct
ttggagcgtattctctatacttgggctattcggcatcctgcgagtggatacgttcaggga
ataaatgatcttgctactccatttttagttgtcttcttgtcagaatacttagaaggtggt
gttgagaaatggtccatctctgatctatctcccgacaagatcacaaacattgaggccgat
tgctactggtgtctttctaaattgctcgatggtatgcaagatcattacacgtttgcacaa
cccggaattcagaggcttgtatttaaattgaaggagctggttaggaggattgatgaacct
gtgtcaagacacatggaggagcagggtctggaatttcttcaattcgcttttcggtggttc
aactgtcttctgatacgcgagattcctttccaccttgttacccggttatgggatacttat
cttgcggaaggggattcattgccagatttccttgtctacatatttgccagttttcttttg
acgtggtctgaggagctgcagaaacttgattttcaagaattggtgatgtttctccagcat
gttccaactcaaaactggacccatcaagagcttgagatggtgctttcaagagcattcatg
tggcacagtatgttcaacaattctccaagacaccttattagctga
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