Cucurbita pepo subsp. pepo (vegetable marrow): 111790468
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Entry
111790468 CDS
T05351
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111790468
03036 Chromosome and associated proteins [BR:
cpep03036
]
111790468
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111790468
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111790468
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111790468
microRNA pathway
RISC loading complex
111790468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
111790468
NCBI-ProteinID:
XP_023527142
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Position
LG03:complement(11678217..11685359)
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AA seq
984 aa
AA seq
DB search
MPVRQMKESSEQHLVIKTHLQNSVQKPQKSTQNGKGPPNLEHQTIKCRNPSSPPSKNRGR
RRSRGGRKSDQGEVYMRPSSRPCTVARKPDEPEFNAGALVASTNPNGGNICGMEMGYRNS
SKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELV
RLYRDSELGKRLPAYDGRKSLYTAGELPFVWKEFNVKLVDEEDGVSGPKREREYKVILRF
VARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGD
GLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDADRVK
IKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTI
QHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDIL
QTVQHNAYDMDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMN
KKMINGMTVNRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNPEPVIPIYNARPDQV
EKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFK
ISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSI
AAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKAT
GQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFA
NNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT
PDGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSAGRSSKSTR
ATGETGVRPLPALKENVKRVMFYC
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgccagtacggcaaatgaaagagagctccgagcagcaccttgtaatcaaaacccacttg
cagaactctgttcaaaaacctcaaaaatcaacccaaaatggcaaaggcccgccgaatctg
gaacatcaaaccatcaaatgtcgaaacccatcttctcctccgagcaaaaacagaggcagg
agaagaagcagaggcggccggaaatccgatcagggggaagtttacatgagacccagttct
cggccctgcacagtggcgcgtaaaccagatgaaccggaatttaacgccggagctctggtg
gcaagtactaatccaaatggtggtaacatttgtggaatggaaatgggttatcgaaattca
agcaagtccttgagttttgccccaaggcctggattcggacaagttgggacaaaatgtatt
gtgaaagcaaaccatttcttcgcagagttaccagacaaagatttgaatcaatatgatgtc
acaattactcctgaagtggcatcaagaactgtgaacagagccatcatggctgaattggtg
agattatacagagattctgagctgggtaaaagattaccagcttatgatggcagaaagagt
ctgtatacagctggtgagcttccttttgtatggaaagagtttaacgtcaagcttgtggat
gaagaagatggagtcagtggtcccaagagggagagggaatataaagtgattcttaggttt
gttgctcgtgcaaatttacaccatttgggtcagtttctggcgggtaagcgtgccgatgct
ccacaagaagctcttcaaatactggatattgtattgagagagttgtcatccaaaaggtac
tgtcctatagggagatccttcttttctcctgatattagatcacctcagcggctcggtgat
gggctagagtcatggtgtgggttttaccaaagtataagacccactcaaatgggactgtct
ctgaatattgatatggcttcagctgcattcattgagcctctccctgtccttgagttcgtt
gctcagctactagggaaagatgtattgtcccggccattgtctgacgctgatcgagtaaag
attaaaaaggctcttaggggggtgaaagttgaagtaacacaccggggaaatgtaaggcgg
aaatatcgggtttcgggtctgacttcacaacctacacgagaattagtatttcctgttgat
gacaactcaaccatgaaatcagttgttgaatacttccaagagatgtatggcttcaccatt
caacacgcacatctcccttgccttcaagtaggaaaccagaagaaggcgaattacttgcca
atggaggcctgcaaaattgttggggggcaaagatatacaaagagattgaatgagaagcaa
ataactgcacttctaaaagtcacgtgtcaaagaccgagggatcgagaaaatgacattttg
cagactgttcaacataatgcttatgatatggatccttatgccaaggagttcgggattaaa
atcagtgaaaagctggcttctgttgaagctagaatcctccctcctccctggctcaaatat
catgatactggaaaagagaaggattgcttgcctcaagttggccaatggaatatgatgaac
aagaaaatgattaatggaatgactgttaatcggtgggcgtgcatcaacttctctaggagt
gtacaagaaagtgttgctcgtgggttttgttccgaacttgctcaaatgtgtcaagtgtcg
ggaatggaattcaatccagaacctgttattccaatatacaatgccaggccagaccaggta
gagaaagctttgaagcatgtttatcatgcctccatgaacaagactaaagggaaagagtta
gagcttttattagctattttacctgacaataacgggtcactttacggtgaccttaagcga
atttgtgaaaccgatcttggtttaatatcacaatgctgtcttacgaaacacgttttcaag
attagtaagcagtaccttgctaatgtgtcactgaagatcaatgtcaagatgggtggtaga
aacactgttcttctagatgctatcagctgcaggataccgcttgtgagtgacataccaaca
ataatatttggagccgacgtgacccatccagagaacggcgaagattccagcccttcaata
gctgctgtagtagcctcccaggattggcctgaagtgactaaatatgctggactagtatgt
gctcaggctcatagacaagaacttatacaagatttgtacaaaacttggcaggatcctgtc
cgtggtactgtcagtggtggcatgatcagggatcttctggtttcctttaggaaagcaaca
gggcagaagcctctcagaataatattttacagggatggcgtaagtgaaggacaattctac
caagtattactttatgagttggatgcaatcaggaaggcatgcgcttctttagaaccgaat
taccaaccacccgtaacgttcattgtcgttcaaaaacgacaccacacacgattgtttgcc
aacaactatcgggatagaagtagcacagacaagagtgggaacattttacctggcaccgta
gttgactccaaaatatgtcacccaacagaatttgatttctatctctgtagccatgctgga
attcaggggacaagtcggccagcacattatcatgttctttgggatgaaaacaattttact
cctgatggaattcagtcattaacgaacaatctttgctacacgtatgcaaggtgtacacgt
tcggtttctgttgttcctccagcatactatgcacatttagctgcattccgagctcgattc
tacatggagccagagatgcaggagaatggctcagctggtcgttcttccaagagcacacgc
gctactggagagactggggttcgacctttgccagctctgaaggaaaatgtgaaaagagta
atgttttactgctag
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