Cucurbita pepo subsp. pepo (vegetable marrow): 111790517
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Entry
111790517 CDS
T05351
Name
(RefSeq) tubulin beta chain-like
KO
K07375
tubulin beta
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04145
Phagosome
cpep04517
IgSF CAM signaling
cpep04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111790517
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111790517
09142 Cell motility
04814 Motor proteins
111790517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111790517
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpep04812
]
111790517
04147 Exosome [BR:
cpep04147
]
111790517
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
111790517
Cytoskeleton proteins [BR:
cpep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
111790517
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111790517
Exosomal proteins of colorectal cancer cells
111790517
Exosomal proteins of bladder cancer cells
111790517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Misat_Tub_SegII
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
111790517
NCBI-ProteinID:
XP_023527204
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All DBs
Position
LG03:418513..420411
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AA seq
446 aa
AA seq
DB search
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSIGKYTGDSDLQLDRINVYYNEASCGRFV
PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDASAEDEDYYEDEDGAEQDE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagattcttcacatccaaggaggccaatgtggcaaccagatcggtgccaagttc
tgggaagtggtttgtgctgagcacggcatcgactccatcggtaagtacactggtgattcc
gatcttcaactcgatcgaattaatgtatactacaatgaggccagttgcgggagattcgtt
cctcgtgccgtgcttatggatcttgagcctggtgttatggacagtatcagatctggacct
tacggtcaggttttccgacctgataacttcgtattcggtcagtctggtgcgggaaacaac
tgggctaaaggacattacaccgaaggtgcggagcttattgattccgttcttgatgttgtt
cgtaaagaggctgagaattgtgactgcctgcaagggttccaggtctgccattcgttggga
ggagggactggatctggaatgggaactcttctgatttccaagatcagagaggaataccct
gacagaatgatgcttacgttctccgttttcccatctcctaaagtttctgatactgttgtt
gagccttacaacgcaaccctctctgttcatcaacttgttgaaaacgccgacgagtgtatg
gtactcgataacgaggctctctacgatatttgcttccgtaccctgaagctctccacccct
agctttggagatcttaaccatctgatttctgcaacgatgtccggtgtgacctgttgttta
cgatttccgggacagctcaactcagatctcaggaaacttgctgtcaatcttatcccattt
cctcgtctccacttttttatggtgggttttgctcccctcacttcccgtggatcccagcaa
tacagggctcttacagtacctgagctcactcagcaaatgtgggatgctaagaacatgatg
tgtgctgctgatccccgacatggtcgctatcttactgcatctgctatgttcagaggcaag
atgagcactaaggaagttgatgaacagatgatcaatgtccagaacaagaactcttcatac
tttgttgaatggatccccaacaatgtgaaatctacagtttgtgacattcctccaaccggt
ttgaaaatggcctctactttcattggaaattcaacatcaatccaagagatgttccgccgt
gtgagtgagcagtttacggccatgtttaggaggaaggctttcttgcattggtacacaggg
gagggtatggatgagatggagtttactgaggccgaaagcaatatgaatgatctggtttct
gagtatcagcaatatcaagatgcttcggctgaggatgaagattactacgaagatgaagac
ggtgcggaacaggatgaatga
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