Cucurbita pepo subsp. pepo (vegetable marrow): 111790547
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Entry
111790547 CDS
T05351
Name
(RefSeq) DNA-binding protein SMUBP-2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_19
AAA_30
Viral_helicase1
DEAD
AAA_22
nSTAND3
AAA
ResIII
AAA_16
AAA_25
RuvB_N
UvrD_C_2
PhoH
UvrD-helicase
ATPase
ABC_tran
NPHP3_N
TPK_catalytic
PIF1
AAA_7
DUF2786
IstB_IS21
SRP54
Glycos_transf_2
Zot
AAA_5
AAA_33
RE_TdeIII
Mg_chelatase
TsaE
Motif
Other DBs
NCBI-GeneID:
111790547
NCBI-ProteinID:
XP_023527256
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All DBs
Position
LG03:2157311..2164077
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AA seq
647 aa
AA seq
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MEGTKTKKKSAPITLEQFVSITAPLLDIEKDAEISASISSGASRNLETAQKKGSTILNLK
CIDASSGLMGKTLLEFQSNKGDVLPPHKFSTHDVVVLKPNKADLGSPSLGQGVVYRLKDS
SITVAFDDIPEEGLSSPLRLEKVANEVTYRRMKDALIQLSKGVHRGPAADLIPVLFGERQ
PSMSKTDVKFKPINSNLDHSQKDAISKALSAKNVFLLHGPPGTGKTTTVVEIILQEVKRG
SKILACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLESALDAQVLRGDNSSLAND
IRKEMKALNGKLLKAKDRNTRRDIQKELRTLSKEERNRQQLAVTDVIKNSDVVLTTLTGA
FSRKLNNISFDLVIIDEAAQALEIACWIALLKASRCILAGDHLQLPPTIQSVEAEKKGLG
RTLFERLADMYGNEVTSMLTVQYRMHELIMDWSSKELYDSKIKAHSSVAAHTLYDLEDVK
KTSSTEPTILLIDTAGCEMEERKDEEESTLNEGEAEVAMAHAKRLIQSGVQPCEIGIITP
YAAQVVLLKMLRSKEDRLKNIEISTVDGFQGREKEAIVISMVRSNSKKEVGFLSDRRRMN
VAVTRARRQCCLVCDTDTVTHDAFLKRLIEYFEENGEYLSASEYQNE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaccaaaaccaagaagaaatcagctcctatcactctggagcaattcgtttcc
atcacggctccactcttagacatcgaaaaggatgcagaaatatctgcgtctatcagctct
ggtgcatccaggaacttggagaccgctcagaaaaagggttctactattctcaacttgaag
tgtattgatgcttcgagtgggctcatggggaaaactcttcttgagtttcaatcaaacaag
ggagacgttcttcctccccacaagtttagcacacatgatgtggtggttttgaaaccaaac
aaagctgatttaggttctccttctcttggtcaaggagtagtttatcggttgaaggactca
tcgattactgttgcttttgatgacatcccagaagagggtttatccagtcctctacggttg
gagaaagtggcaaatgaggtgacatatcgtaggatgaaggatgccctgatacaattgagc
aaaggggtacatagaggaccggctgctgatcttattcctgtattatttggagagaggcaa
ccatcaatgtccaaaactgatgttaaattcaaacccatcaattccaatcttgatcactct
cagaaagatgccatctcaaaggccctatcagcaaaaaatgtatttctgctgcatggtccc
ccaggaaccggaaaaaccacaacagtggtggaaattatcttacaagaagtaaagcgtgga
tcaaaaattctagcatgtgctgcttcaaatattgctgtcgacaacattgttgagagactt
gttcctcacagagtgaagttggtgagactgggacatcctgctcgtctacttcctcaagtc
ttggagagtgctctagatgcccaggtcttgcgtggggacaatagttctcttgcaaatgac
atccggaaagagatgaaggcattgaatgggaagcttctgaaagccaaggaccgaaacaca
cggagagacatccagaaggagcttagaacattgtcgaaggaagagcggaataggcagcag
ttagcagtaacagatgtaataaaaaattcagatgttgttctaacaactttgacaggggca
ttttctcgcaaactgaataatatttcatttgatttggtaataattgatgaagctgctcaa
gctcttgaaattgcatgctggatagctttgttgaaggcatcaagatgcattcttgccgga
gaccatcttcagcttcctccaacaatccaaagtgttgaagcagagaagaagggacttgga
agaaccctatttgaacgcctggctgacatgtatggaaatgaagtaacctctatgctcacc
gtccagtatcgtatgcatgaactgatcatggattggtcatcaaaagagctatatgatagt
aagatcaaagctcattcaagtgttgctgcacatacgctttatgaccttgaggatgtgaaa
aagacatcatcaactgaacctaccattctgctcatagacacagcagggtgtgaaatggaa
gaaagaaaggatgaggaagaaagcactttaaatgaaggtgaagctgaggttgccatggct
catgcaaagagactaatccaaagtggcgttcaaccttgtgaaattggaattataactcct
tatgctgcacaggttgtgttactgaaaatgttaagaagcaaagaagacagactaaaaaac
attgaaatctccacagttgatggcttccagggaagagagaaggaagctatcgtcatctcc
atggttcgatcaaattcaaagaaggaggtaggattcttgagcgaccgtagacgaatgaat
gtagctgtgactcgagctagaaggcaatgttgtctggtctgcgacaccgatacggtaact
cacgatgcatttttgaagcgattaatcgaatattttgaagaaaatggtgagtatcttagt
gcctctgagtatcagaatgagtag
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