Cucurbita pepo subsp. pepo (vegetable marrow): 111790587
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Entry
111790587 CDS
T05351
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111790587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111790587
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111790587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_Prp19
eIF2A
PD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Lactonase
KTSC
Motif
Other DBs
NCBI-GeneID:
111790587
NCBI-ProteinID:
XP_023527318
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Position
LG03:2357656..2363312
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AA seq
449 aa
AA seq
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MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLESPIPEPN
NEARNDEANGESIQRKSVIASLQGFLEGSIKRFLRPNDVKYLPAEYLQGVSWHQHKHILA
FISGTNQVVVRDFENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKDGICIWAASF
PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRYLASASYESSS
FTIWDVAQGLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSG
FVTGAIWDPDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNSQGIEKI
AWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGDNPKPAAFSFHGK
FKQGPLLSVCWSSGFCCTYPLIFRSHVVP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatttcctcctcctgggtctgttaccatctgcgaaatcaatcgcgacctcatt
actgctgatcgaatctccgatgatctggcgaacgacacttatgggaaagtccttggtatg
gtgtttagtcctgttccatttcagtcggattttttggagtcaccgattcctgaaccgaac
aatgaggctagaaatgatgaagcaaatggggaaagtatccaaaggaagagtgtgattgca
tctttgcagggattcctcgagggctccatcaagcgctttttacgtcctaatgatgtaaaa
tacttaccagcagaatatcttcaaggagtgagttggcaccagcacaagcatattttagca
ttcatatctgggacgaatcaagttgttgtccgtgattttgaaaatgcagaaggaaaagac
ccttgcattttgacccacgacttgcaaagagatgttaaagttcttgagtggagaccaaat
ggcgggaggactctttcggtggcatgcaaagatggaatttgcatctgggctgcttctttc
ccaggaaatgctgcttcggtgagacctggtgccgtgtccttcttaggatcattctcaaga
ggctctggggttcgatataccctagttgattttcttcgaacccgtgatgaacagattagt
gccctgtcatggagtcctgatggaagatatctagcatctgcatcttatgagagctcttct
tttaccatttgggatgtcgctcaagggttgggaacacccattaggcgtggattagggtgt
gtatcaacaatcaagtggtcaccttctggagattacttttttgctgcaaaattggatgga
acattttatctttgggaaacgaacacatggacatctgaacagtggtcgacaacaagtggt
tttgtcacgggagcaatatgggatcctgatggacgtatgatactacttgctttctctgag
tcttcagtattgggttcaattcattttgcatctaagcctccgtcattagttgcacatctg
ctagctgttgacttgcctgagataactactttgacgaacagtcagggtattgagaagata
gcatgggatgcttcaggagagcgactggctgtctctttcaaggatggagatgaattatat
aatggcctgatcgcagtatatgatattaaaaggactcccctgatttgtccatcattgatt
ggctttattagaggacctggagacaatccaaagccagctgcattttcgttccatggcaag
ttcaagcagggacctttgctttcagtgtgttggagcagtggattttgctgtacctatcct
ctcatattccgctctcacgttgttccttag
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